Factsheet for Zm00001d032610_P003

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid, secretory
MultiLoc:	golgi
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d002952_P001
Zm00001d008871_P001
Zm00001d010783_P001
Zm00001d013956_P003
Zm00001d032610_P003
Zm00001d038803_P001
Zm00001d048520_P014

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G73190.1	Zm00001d002952_P001	AT1G73190.1	23163742
AT1G73190.1	Zm00001d013956_P003	AT1G73190.1	23163742
AT1G73190.1	Zm00001d032610_P003	AT1G73190.1	23163742
AT1G73190.1	Zm00001d048520_P014	AT1G73190.1	23163742
AT1G73190.1	Zm00001d008871_P001	AT3G16310.1	21798944
AT1G73190.1	Zm00001d010783_P001	AT3G16310.1	21798944
AT1G73190.1	Zm00001d038803_P001	AT3G16310.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013956_P003	Maize	plasma membrane	92.86	94.27
EER94020	Sorghum	golgi, mitochondrion, plasma membrane	91.73	91.73
Os10t0492600-01	Rice	plastid	85.71	86.36
TraesCS1A01G165400.1	Wheat	golgi, mitochondrion, plasma membrane, plastid	82.33	83.27
TraesCS1D01G175200.1	Wheat	unclear	81.58	82.51
HORVU1Hr1G043890.2	Barley	mitochondrion	81.58	82.51
TraesCS1B01G182200.1	Wheat	golgi	81.2	82.13
GSMUA_Achr4P26010_001	Banana	cytosol, golgi, plasma membrane	74.81	78.35
GSMUA_Achr2P10640_001	Banana	cytosol, golgi, plasma membrane	72.93	76.38
VIT_16s0039g00220.t01	Wine grape	cytosol	64.66	66.41
PGSC0003DMT400069330	Potato	cytosol	63.53	65.25
Solyc06g072130.2.1	Tomato	extracellular	63.53	65.25
Solyc03g019820.2.1	Tomato	cytosol, golgi, plasma membrane	62.03	63.46
PGSC0003DMT400039507	Potato	cytosol, golgi, plasma membrane	62.03	63.46
CDY66321	Canola	plasma membrane	62.41	62.41
CDY11123	Canola	cytosol	61.65	61.89
CDX72962	Canola	plasma membrane	61.65	61.89
CDX68239	Canola	cytosol	61.65	61.89
CDY48045	Canola	golgi, mitochondrion, plasma membrane	61.65	61.65
Bra008079.1-P	Field mustard	golgi, mitochondrion, plasma membrane	61.65	61.65
AT1G73190.1	Thale cress	plasma membrane	62.03	61.57
Bra016014.1-P	Field mustard	cytosol	61.28	61.51
CDX96453	Canola	cytosol	61.28	61.51
KRH38823	Soybean	nucleus	58.27	60.78
KRH09321	Soybean	cytosol, mitochondrion, plasma membrane	58.27	60.78
AT1G17810.1	Thale cress	cytosol, golgi, plasma membrane	60.53	60.3
Bra025947.1-P	Field mustard	cytosol, golgi, plasma membrane	60.53	60.3
KRH34280	Soybean	endoplasmic reticulum	57.52	60.24
CDY19176	Canola	plasma membrane	60.15	59.93
CDX81850	Canola	golgi, mitochondrion, plasma membrane	60.15	59.93
Bra031005.1-P	Field mustard	golgi, mitochondrion, plasma membrane	60.15	59.93
CDY21731	Canola	golgi, mitochondrion, plasma membrane	60.15	59.93
CDY26214	Canola	plasma membrane	60.15	59.93
Zm00001d002952_P001	Maize	plasma membrane	59.02	59.25
KRG92517	Soybean	cytosol	56.02	58.66
Zm00001d011778_P001	Maize	plasma membrane	54.89	57.48
Zm00001d027652_P001	Maize	plasma membrane	52.63	56.0
Zm00001d051362_P001	Maize	plasma membrane	46.99	50.2
Zm00001d017485_P002	Maize	endoplasmic reticulum, extracellular, plasma membrane	46.24	49.2
Zm00001d002738_P001	Maize	plasma membrane	44.74	47.98
Zm00001d026177_P001	Maize	extracellular	44.36	47.58
Zm00001d039713_P001	Maize	plasma membrane	43.61	46.59
Zm00001d039293_P001	Maize	plastid	48.12	44.6
Zm00001d015518_P001	Maize	endoplasmic reticulum, extracellular	17.29	43.4
Zm00001d019676_P001	Maize	endoplasmic reticulum, extracellular, plastid	17.29	43.4
Zm00001d048520_P014	Maize	mitochondrion	42.86	42.54
Zm00001d037779_P001	Maize	cytosol, plasma membrane, vacuole	39.1	40.78
Zm00001d020747_P001	Maize	extracellular	15.41	38.32
Zm00001d026178_P002	Maize	plastid	36.47	36.33
Zm00001d010410_P001	Maize	plasma membrane, plastid	39.1	33.44
Zm00001d005421_P001	Maize	plasma membrane	35.71	32.53
Zm00001d014285_P001	Maize	plasma membrane	34.59	32.51
Zm00001d005410_P001	Maize	plasma membrane	33.83	31.47
Zm00001d019563_P006	Maize	plasma membrane	34.21	31.38
Zm00001d022608_P001	Maize	plasma membrane	33.46	30.9
Zm00001d019565_P001	Maize	plasma membrane	33.46	30.9
Zm00001d003006_P001	Maize	plasma membrane	33.08	30.88
Zm00001d017288_P001	Maize	plasma membrane	32.71	30.21
Zm00001d051174_P002	Maize	plasma membrane	32.71	30.1
Zm00001d002690_P001	Maize	plasma membrane	31.2	28.82
Zm00001d051872_P001	Maize	plasma membrane	31.2	28.82
Zm00001d017526_P001	Maize	plasma membrane	30.83	28.37
Zm00001d051403_P001	Maize	plasma membrane	30.83	28.08

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.3	EntrezGene:541912	UniProt:A0A1D6KSA0	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005774	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS	ProteinID:ONM05554.1
PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF132	SUPFAM:SSF81338
TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI00022191ED	EnsemblPlantsGene:Zm00001d032610	EnsemblPlants:Zm00001d032610_P003	EnsemblPlants:Zm00001d032610_T003
SEG:seg	:	:	:	:	:

Description

tonoplast intrinsic protein3 tonoplast intrinsic protein3

Coordinates

chr1:-:232015987..232017309

Molecular Weight (calculated)

27363.3 Da

IEP (calculated)

8.794

GRAVY (calculated)

0.603

Length

266 amino acids

Sequence
(BLAST)

001: MSTATGVRAG RRFTVGRSED ATHPDTIRAA ISEFIATAIF VFAAEGSVLS LGKMYHDHST ISTAGGLVAV ALAHALGLAV AVAVAVNVSG GHVNPAVTFG
101: ALVGGRVSLV RAVLYWAAQL LGAVAATLLL RLATGGARPP GFALASGVGD GHAVLLEAVM TFGLVYAYYA TVVDPKRGHL GTIAPLAVGF LLGANVLAGG
201: PFDGAGMNPA RVFGPALVGW RWRHHWVYWL GPFLGAGLAG LVYEYLLIPP ADAVPHTHQP LAPEDY

Best Arabidopsis Sequence Match ( AT1G17810.1 )
(BLAST)

001: MATSARRAYG FGRADEATHP DSIRATLAEF LSTFVFVFAG EGSILALDKL YWDTAAHTGT NTPGGLVLVA LAHALALFAA VSAAINVSGG HVNPAVTFAA
101: LIGGRISVIR AIYYWVAQLI GAILACLLLR LATNGLRPVG FHVASGVSEL HGLLMEIILT FALVYVVYST AIDPKRGSIG IIAPLAIGLI VGANILVGGP
201: FDGASMNPAR AFGPALVGWR WSNHWIYWVG PFIGGALAAL IYEYMIIPSV NEPPHHSTHQ PLAPEDY

Arabidopsis Description

TIP3-2BETA-TIP [Source:UniProtKB/TrEMBL;Acc:A0A178WI57]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.