Factsheet for Solyc03g019820.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:

plastid 1
vacuole 2
golgi 1
mitochondrion 1
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g071920.2.1
Solyc03g005980.2.1
Solyc03g019820.2.1
Solyc03g120880.2.1
Solyc06g072130.2.1
Solyc06g074170.2.1
Solyc11g068750.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G73190.1	Solyc03g019820.2.1	AT1G73190.1	23163742
AT1G73190.1	Solyc06g072130.2.1	AT1G73190.1	23163742
AT1G73190.1	Solyc03g120880.2.1	AT3G16310.1	21798944
AT1G73190.1	Solyc02g071920.2.1	AT4G19030.1	21798944
AT1G73190.1	Solyc03g005980.2.1	AT4G19030.1	21798944
AT1G73190.1	Solyc06g074170.2.1	AT5G22290.1	21798944
AT1G73190.1	Solyc11g068750.1.1	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400039507	Potato	cytosol, golgi, plasma membrane	99.62	99.62
Solyc06g072130.2.1	Tomato	extracellular	81.15	81.47
VIT_16s0039g00220.t01	Wine grape	cytosol	70.77	71.04
AT1G17810.1	Thale cress	cytosol, golgi, plasma membrane	70.38	68.54
GSMUA_Achr4P26010_001	Banana	cytosol, golgi, plasma membrane	66.54	68.11
KRH09321	Soybean	cytosol, mitochondrion, plasma membrane	66.54	67.84
GSMUA_Achr2P10640_001	Banana	cytosol, golgi, plasma membrane	66.15	67.72
KRH38823	Soybean	nucleus	66.15	67.45
KRH34280	Soybean	endoplasmic reticulum	65.38	66.93
CDX81850	Canola	golgi, mitochondrion, plasma membrane	68.08	66.29
KRG92517	Soybean	cytosol	64.62	66.14
CDX68239	Canola	cytosol	67.31	66.04
CDY11123	Canola	cytosol	67.31	66.04
Bra031005.1-P	Field mustard	golgi, mitochondrion, plasma membrane	67.69	65.92
CDY21731	Canola	golgi, mitochondrion, plasma membrane	67.69	65.92
Bra008079.1-P	Field mustard	golgi, mitochondrion, plasma membrane	67.31	65.79
CDY48045	Canola	golgi, mitochondrion, plasma membrane	67.31	65.79
CDY66321	Canola	plasma membrane	67.31	65.79
Bra025947.1-P	Field mustard	cytosol, golgi, plasma membrane	67.31	65.54
CDY19176	Canola	plasma membrane	67.31	65.54
AT1G73190.1	Thale cress	plasma membrane	67.31	65.3
Bra016014.1-P	Field mustard	cytosol	66.54	65.28
CDX72962	Canola	plasma membrane	66.54	65.28
CDY26214	Canola	plasma membrane	66.92	65.17
CDX96453	Canola	cytosol	66.15	64.91
EER94020	Sorghum	golgi, mitochondrion, plasma membrane	64.23	62.78
Zm00001d032610_P003	Maize	mitochondrion, plastid	63.46	62.03
Zm00001d013956_P003	Maize	plasma membrane	62.31	61.83
Solyc10g083880.1.1	Tomato	plastid	58.08	60.89
HORVU1Hr1G043890.2	Barley	mitochondrion	60.38	59.7
TraesCS1D01G175200.1	Wheat	unclear	60.38	59.7
TraesCS1A01G165400.1	Wheat	golgi, mitochondrion, plasma membrane, plastid	60.38	59.7
TraesCS1B01G182200.1	Wheat	golgi	60.0	59.32
Os10t0492600-01	Rice	plastid	60.0	59.09
Solyc06g075650.2.1	Tomato	endoplasmic reticulum	53.46	54.94
Os04t0527900-01	Rice	plastid	55.77	54.72
Zm00001d002952_P001	Maize	plasma membrane	55.0	53.96
TraesCS2D01G370800.1	Wheat	plasma membrane	55.0	53.96
Solyc06g074820.2.1	Tomato	plastid	51.54	53.6
TraesCS2A01G374400.1	Wheat	plasma membrane	54.62	53.58
TraesCS2B01G391400.1	Wheat	extracellular, plasma membrane, vacuole	54.23	53.21
EES11105	Sorghum	mitochondrion, plasma membrane	54.62	52.99
Solyc06g060760.2.1	Tomato	endoplasmic reticulum	50.38	52.4
Solyc12g044330.1.1	Tomato	plastid	48.46	50.81
Solyc08g066840.2.1	Tomato	endoplasmic reticulum, plasma membrane	44.23	46.56
Solyc06g066560.1.1	Tomato	mitochondrion	48.85	46.52
EER95659	Sorghum	mitochondrion	46.54	44.65
Solyc03g093230.2.1	Tomato	plastid	42.69	44.22
Zm00001d048520_P014	Maize	mitochondrion	34.62	33.58
Solyc09g007770.2.1	Tomato	nucleus	31.15	31.27
Solyc02g083510.2.1	Tomato	nucleus	31.15	31.27
Solyc10g084120.1.1	Tomato	nucleus	32.31	29.89
Solyc01g094690.2.1	Tomato	nucleus	31.92	29.12
Solyc03g096290.2.1	Tomato	nucleus	31.15	28.32
Solyc11g069430.1.1	Tomato	plastid	31.15	28.22
Solyc08g008050.2.1	Tomato	peroxisome	31.15	28.22
Solyc06g011350.2.1	Tomato	nucleus	30.38	28.21
Solyc12g056220.1.1	Tomato	plastid	31.15	28.12
Solyc08g081190.2.1	Tomato	plastid	30.77	27.97
Solyc01g111660.2.1	Tomato	nucleus	30.38	27.92
Solyc10g055630.1.1	Tomato	nucleus, plastid	29.23	26.86
Solyc09g007760.2.1	Tomato	extracellular	31.15	26.47
Solyc05g055990.2.1	Tomato	nucleus, plasma membrane	25.38	22.84

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.3	EMBL:AB845623	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833	GO:GO:0008150	GO:GO:0009705
GO:GO:0015250	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0042807
GO:GO:0055085	InterPro:IPR023271	UniProt:K4BEV4	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230
PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF30	SUPFAM:SSF81338	EnsemblPlantsGene:Solyc03g019820.2
EnsemblPlants:Solyc03g019820.2.1	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI0001B34C0F	SEG:seg	:

Description

Tonoplast intrinsic protein 32 [Source:UniProtKB/TrEMBL;Acc:K4BEV4]

Coordinates

chr3:+:61355168..61356506

Molecular Weight (calculated)

27793.8 Da

IEP (calculated)

9.222

GRAVY (calculated)

0.489

Length

260 amino acids

Sequence
(BLAST)

001: MAMPARRYAF GRADEATHPD SMRATLSELL STFIFVFAGE GSVLAIDKLY PDTGLGSSRL IVIALAHAFS FFAAVASSLN VSGGHINPAV TFGSLVGGRI
101: SVVRAIYYWV AQLFGSVLAS LLLRLATDGL RPRGFSVAAG VGNLNALVME IVMTFGLMYT VYATAVDPRR GSLSTIAPLA IAFILGANTL VGGPFEGASM
201: NPARAFGPAL VGWRWRNHWI YWLGPFIGAA LAGLIYEYGI IQHETVPRPT THQPLAPEDY

Best Arabidopsis Sequence Match ( AT1G17810.1 )
(BLAST)

001: MATSARRAYG FGRADEATHP DSIRATLAEF LSTFVFVFAG EGSILALDKL YWDTAAHTGT NTPGGLVLVA LAHALALFAA VSAAINVSGG HVNPAVTFAA
101: LIGGRISVIR AIYYWVAQLI GAILACLLLR LATNGLRPVG FHVASGVSEL HGLLMEIILT FALVYVVYST AIDPKRGSIG IIAPLAIGLI VGANILVGGP
201: FDGASMNPAR AFGPALVGWR WSNHWIYWVG PFIGGALAAL IYEYMIIPSV NEPPHHSTHQ PLAPEDY

Arabidopsis Description

TIP3-2BETA-TIP [Source:UniProtKB/TrEMBL;Acc:A0A178WI57]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.