Factsheet for Zm00001d048520_P014

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d002952_P001
Zm00001d008871_P001
Zm00001d010783_P001
Zm00001d013956_P003
Zm00001d032610_P003
Zm00001d038803_P001
Zm00001d048520_P014

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G73190.1	Zm00001d002952_P001	AT1G73190.1	23163742
AT1G73190.1	Zm00001d013956_P003	AT1G73190.1	23163742
AT1G73190.1	Zm00001d032610_P003	AT1G73190.1	23163742
AT1G73190.1	Zm00001d048520_P014	AT1G73190.1	23163742
AT1G73190.1	Zm00001d008871_P001	AT3G16310.1	21798944
AT1G73190.1	Zm00001d010783_P001	AT3G16310.1	21798944
AT1G73190.1	Zm00001d038803_P001	AT3G16310.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95659	Sorghum	mitochondrion	52.99	52.4
Zm00001d013956_P003	Maize	plasma membrane	42.54	43.51
Zm00001d032610_P003	Maize	mitochondrion, plastid	42.54	42.86
GSMUA_Achr4P26010_001	Banana	cytosol, golgi, plasma membrane	39.55	41.73
GSMUA_Achr2P10640_001	Banana	cytosol, golgi, plasma membrane	38.81	40.94
VIT_16s0039g00220.t01	Wine grape	cytosol	36.19	37.45
Bra016014.1-P	Field mustard	cytosol	36.19	36.6
CDY66321	Canola	plasma membrane	36.19	36.47
CDX72962	Canola	plasma membrane	35.82	36.23
CDX96453	Canola	cytosol	35.82	36.23
KRH34280	Soybean	endoplasmic reticulum	34.33	36.22
CDY48045	Canola	golgi, mitochondrion, plasma membrane	35.82	36.09
Bra008079.1-P	Field mustard	golgi, mitochondrion, plasma membrane	35.82	36.09
CDX68239	Canola	cytosol	35.45	35.85
CDY11123	Canola	cytosol	35.45	35.85
KRG92517	Soybean	cytosol	33.96	35.83
KRH09321	Soybean	cytosol, mitochondrion, plasma membrane	33.96	35.69
Zm00001d011778_P001	Maize	plasma membrane	33.58	35.43
KRH38823	Soybean	nucleus	33.58	35.29
AT1G73190.1	Thale cress	plasma membrane	35.07	35.07
PGSC0003DMT400039507	Potato	cytosol, golgi, plasma membrane	33.58	34.62
Solyc03g019820.2.1	Tomato	cytosol, golgi, plasma membrane	33.58	34.62
AT1G17810.1	Thale cress	cytosol, golgi, plasma membrane	34.33	34.46
CDY26214	Canola	plasma membrane	33.96	34.08
CDY19176	Canola	plasma membrane	33.96	34.08
Bra025947.1-P	Field mustard	cytosol, golgi, plasma membrane	33.96	34.08
PGSC0003DMT400069330	Potato	cytosol	32.84	33.98
Solyc06g072130.2.1	Tomato	extracellular	32.84	33.98
CDX81850	Canola	golgi, mitochondrion, plasma membrane	33.58	33.71
CDY21731	Canola	golgi, mitochondrion, plasma membrane	33.21	33.33
Bra031005.1-P	Field mustard	golgi, mitochondrion, plasma membrane	33.21	33.33
Zm00001d002952_P001	Maize	plasma membrane	32.46	32.83
Zm00001d027652_P001	Maize	plasma membrane	29.48	31.6
Zm00001d039713_P001	Maize	plasma membrane	29.1	31.33
Zm00001d051362_P001	Maize	plasma membrane	28.73	30.92
Zm00001d002738_P001	Maize	plasma membrane	28.36	30.65
Zm00001d017485_P002	Maize	endoplasmic reticulum, extracellular, plasma membrane	28.36	30.4
Zm00001d026177_P001	Maize	extracellular	27.61	29.84
Zm00001d026178_P002	Maize	plastid	27.61	27.72
Zm00001d039293_P001	Maize	plastid	29.1	27.18
Zm00001d037779_P001	Maize	cytosol, plasma membrane, vacuole	24.25	25.49
Zm00001d005410_P001	Maize	plasma membrane	24.25	22.73
Zm00001d014285_P001	Maize	plasma membrane	23.88	22.61
Zm00001d019565_P001	Maize	plasma membrane	24.25	22.57
Zm00001d005421_P001	Maize	plasma membrane	24.25	22.26
Zm00001d017288_P001	Maize	plasma membrane	23.51	21.88
Zm00001d051174_P002	Maize	plasma membrane	23.51	21.8
Zm00001d003006_P001	Maize	plasma membrane	23.13	21.75
Zm00001d019563_P006	Maize	plasma membrane	23.51	21.72
Zm00001d010410_P001	Maize	plasma membrane, plastid	25.0	21.54
Zm00001d017526_P001	Maize	plasma membrane	22.76	21.11
Zm00001d002690_P001	Maize	plasma membrane	22.39	20.83
Zm00001d051872_P001	Maize	plasma membrane	22.39	20.83
Zm00001d051403_P001	Maize	plasma membrane	22.39	20.55
Zm00001d022608_P001	Maize	plasma membrane	21.64	20.14
Zm00001d015518_P001	Maize	endoplasmic reticulum, extracellular	6.72	16.98
Zm00001d019676_P001	Maize	endoplasmic reticulum, extracellular, plastid	6.34	16.04
Zm00001d020747_P001	Maize	extracellular	6.34	15.89

Protein Annotations

Gene3D:1.20.1080.10	EntrezGene:100280539	MapMan:35.1	UniProt:A0A1D6PLK2	ProteinID:AQL10080.1	InterPro:Aquaporin-like
InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	InterPro:MIP
InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF132
SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI000844D192	EnsemblPlantsGene:Zm00001d048520	EnsemblPlants:Zm00001d048520_P014	EnsemblPlants:Zm00001d048520_T014
SEG:seg	:	:	:	:	:

Description

Aquaporin TIP3.1

Coordinates

chr9:-:157714428..157715703

Molecular Weight (calculated)

28012.1 Da

IEP (calculated)

12.557

GRAVY (calculated)

-0.249

Length

268 amino acids

Sequence
(BLAST)

001: MNMIRAVRRR FTVGHLATAK DPATLRHAAA ELLATAIFVF AAEGATLSLG RMHHHDKGGG GLVAVALAHA LALAAAVGCA ANISGGHVNP AVTFGALLAG
101: RICLVRSLVY WAAQLLGAVA AALVLRLATG GGHGVRAHVR LLCDGDGQSA EGPRRRRSAG GAARRGASGG GQRAGLRRAG GRRDESGARV RARRRGLPSL
201: ETPMGVLGGA HGRRRPLRRR LRAPRRRPGR RGGGARAELR RPPSCVEDYM HAGAAGRRRR PRSSESSE

Best Arabidopsis Sequence Match ( AT3G26520.1 )
(BLAST)

001: MPTRNIAIGG VQEEVYHPNA LRAALAEFIS TLIFVFAGSG SGIAFNKITD NGATTPSGLV AAALAHAFGL FVAVSVGANI SGGHVNPAVT FGVLLGGNIT
101: LLRGILYWIA QLLGSVAACF LLSFATGGEP IPAFGLSAGV GSLNALVFEI VMTFGLVYTV YATAVDPKNG SLGTIAPIAI GFIVGANILA GGAFSGASMN
201: PAVAFGPAVV SWTWTNHWVY WAGPLIGGGL AGIIYDFVFI DENAHEQLPT TDY

Arabidopsis Description

TIP1-2Aquaporin TIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q41963]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.