Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0146100-01 | Rice | nucleus | 95.2 | 95.2 |
| EER92857 | Sorghum | cytosol | 94.4 | 94.4 |
| HORVU4Hr1G079230.1 | Barley | vacuole | 90.4 | 90.4 |
| TraesCS4B01G310900.1 | Wheat | unclear | 90.0 | 90.0 |
| TraesCS4A01G410800.1 | Wheat | golgi, plasma membrane, vacuole | 89.6 | 89.6 |
| TraesCS4D01G308800.1 | Wheat | golgi, plasma membrane, vacuole | 88.0 | 85.6 |
| GSMUA_Achr1P01270_001 | Banana | cytosol, plasma membrane, vacuole | 84.8 | 84.8 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular, vacuole | 84.0 | 84.0 |
| GSMUA_Achr8P12920_001 | Banana | cytosol, plasma membrane, vacuole | 83.6 | 83.6 |
| Solyc06g074820.2.1 | Tomato | plastid | 81.2 | 81.2 |
| GSMUA_Achr5P19470_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 81.2 | 80.88 |
| PGSC0003DMT400018375 | Potato | cytosol | 80.8 | 80.8 |
| VIT_08s0007g04780.t01 | Wine grape | cytosol | 80.4 | 80.08 |
| CDY67380 | Canola | plastid | 70.4 | 79.64 |
| CDY66645 | Canola | plastid | 70.4 | 79.64 |
| Bra017222.1-P | Field mustard | cytosol | 78.4 | 78.09 |
| CDY53270 | Canola | plasma membrane | 77.6 | 77.29 |
| AT2G36830.1 | Thale cress | golgi, plasma membrane, vacuole | 76.8 | 76.49 |
| CDY13639 | Canola | plasma membrane | 76.8 | 75.89 |
| CDX83623 | Canola | golgi, plasma membrane, plastid | 76.8 | 75.89 |
| KRH67767 | Soybean | mitochondrion | 75.6 | 75.6 |
| CDY48983 | Canola | plasma membrane | 76.4 | 75.49 |
| CDY28539 | Canola | plasma membrane | 76.4 | 75.49 |
| Bra032937.1-P | Field mustard | plasma membrane | 76.4 | 75.49 |
| Bra025210.1-P | Field mustard | plasma membrane | 76.4 | 75.49 |
| AT3G26520.1 | Thale cress | plasma membrane | 76.0 | 75.1 |
| KRG96046 | Soybean | nucleus | 74.0 | 74.0 |
| Zm00001d011778_P001 | Maize | plasma membrane | 74.0 | 72.83 |
| VIT_06s0061g00730.t01 | Wine grape | cytosol, plasma membrane, vacuole | 72.4 | 72.11 |
| Zm00001d002738_P001 | Maize | plasma membrane | 62.4 | 62.9 |
| Zm00001d017485_P002 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 62.8 | 62.8 |
| Zm00001d026177_P001 | Maize | extracellular | 62.0 | 62.5 |
| Zm00001d051362_P001 | Maize | plasma membrane | 61.2 | 61.45 |
| Zm00001d013956_P003 | Maize | plasma membrane | 56.4 | 53.82 |
| Zm00001d032610_P003 | Maize | mitochondrion, plastid | 56.0 | 52.63 |
| Zm00001d002952_P001 | Maize | plasma membrane | 52.8 | 49.81 |
| Zm00001d039713_P001 | Maize | plasma membrane | 45.6 | 45.78 |
| Zm00001d039293_P001 | Maize | plastid | 51.6 | 44.95 |
| Zm00001d037779_P001 | Maize | cytosol, plasma membrane, vacuole | 45.6 | 44.71 |
| Zm00001d015518_P001 | Maize | endoplasmic reticulum, extracellular | 18.4 | 43.4 |
| Zm00001d019676_P001 | Maize | endoplasmic reticulum, extracellular, plastid | 18.4 | 43.4 |
| Zm00001d020747_P001 | Maize | extracellular | 17.2 | 40.19 |
| Zm00001d010410_P001 | Maize | plasma membrane, plastid | 45.6 | 36.66 |
| Zm00001d026178_P002 | Maize | plastid | 37.2 | 34.83 |
| Zm00001d005421_P001 | Maize | plasma membrane | 36.8 | 31.51 |
| Zm00001d017288_P001 | Maize | plasma membrane | 36.0 | 31.25 |
| Zm00001d022608_P001 | Maize | plasma membrane | 36.0 | 31.25 |
| Zm00001d051174_P002 | Maize | plasma membrane | 36.0 | 31.14 |
| Zm00001d005410_P001 | Maize | plasma membrane | 35.6 | 31.12 |
| Zm00001d019563_P006 | Maize | plasma membrane | 36.0 | 31.03 |
| Zm00001d014285_P001 | Maize | plasma membrane | 34.8 | 30.74 |
| Zm00001d019565_P001 | Maize | plasma membrane | 35.2 | 30.56 |
| Zm00001d003006_P001 | Maize | plasma membrane | 34.4 | 30.18 |
| Zm00001d048520_P014 | Maize | mitochondrion | 31.6 | 29.48 |
| Zm00001d051872_P001 | Maize | plasma membrane | 33.2 | 28.82 |
| Zm00001d017526_P001 | Maize | plasma membrane | 32.0 | 27.68 |
| Zm00001d002690_P001 | Maize | plasma membrane | 31.6 | 27.43 |
| Zm00001d051403_P001 | Maize | plasma membrane | 31.6 | 27.05 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.3 | EntrezGene:541675 | EMBL:AF037061 | EMBL:AY243803 | InterPro:Aquaporin-like |
| InterPro:Aquaporin_transptr | UniProt:B4FUH7 | EMBL:BT040765 | EMBL:BT040957 | EMBL:BT065324 | EMBL:BT066430 |
| EMBL:EU951786 | EMBL:EU952817 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0006810 | GO:GO:0006833 |
| GO:GO:0007033 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009705 | GO:GO:0009826 |
| GO:GO:0009987 | GO:GO:0015250 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 |
| GO:GO:0016049 | GO:GO:0040007 | GO:GO:0048366 | GO:GO:0055085 | InterPro:IPR023271 | InterPro:MIP |
| InterPro:MIP_CS | UniProt:O64964 | ProteinID:ONL93611.1 | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 |
| PANTHER:PTHR19139 | PANTHER:PTHR19139:SF265 | SUPFAM:SSF81338 | TMHMM:TMhelix | UniParc:UPI00000A8737 | EnsemblPlantsGene:Zm00001d027652 |
| EnsemblPlants:Zm00001d027652_P001 | EnsemblPlants:Zm00001d027652_T001 | SEG:seg | : | : | : |
Description
TIP1-1Aquaporin TIP1-1
Coordinates
chr1:-:10150836..10152891
Molecular Weight (calculated)
25822.4 Da
IEP (calculated)
6.505
GRAVY (calculated)
0.771
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MPINRIALGS HQEVYHPGAL KAAFAEFIST LIFVFAGQGS GMAFSKLTGG GPTTPAGLIA AAVAHAFALF VAVSVGANIS GGHVNPAVTF GAFVGGNITL
101: FRGLLYWVAQ LLGSTVACFL LRFSTGGQAT GTFGLTGVSV WEALVLEIVM TFGLVYTVYA TAVDPKKGSL GTIAPIAIGF IVGANILVGG AFDGASMNPA
201: VSFGPALVSW EWGYQWVYWV GPLIGGGLAG VIYELLFISH THEQLPSTDY
101: FRGLLYWVAQ LLGSTVACFL LRFSTGGQAT GTFGLTGVSV WEALVLEIVM TFGLVYTVYA TAVDPKKGSL GTIAPIAIGF IVGANILVGG AFDGASMNPA
201: VSFGPALVSW EWGYQWVYWV GPLIGGGLAG VIYELLFISH THEQLPSTDY
001: MPIRNIAIGR PDEATRPDAL KAALAEFIST LIFVVAGSGS GMAFNKLTEN GATTPSGLVA AAVAHAFGLF VAVSVGANIS GGHVNPAVTF GAFIGGNITL
101: LRGILYWIAQ LLGSVVACLI LKFATGGLAV PAFGLSAGVG VLNAFVFEIV MTFGLVYTVY ATAIDPKNGS LGTIAPIAIG FIVGANILAG GAFSGASMNP
201: AVAFGPAVVS WTWTNHWVYW AGPLVGGGIA GLIYEVFFIN TTHEQLPTTD Y
101: LRGILYWIAQ LLGSVVACLI LKFATGGLAV PAFGLSAGVG VLNAFVFEIV MTFGLVYTVY ATAIDPKNGS LGTIAPIAIG FIVGANILAG GAFSGASMNP
201: AVAFGPAVVS WTWTNHWVYW AGPLVGGGIA GLIYEVFFIN TTHEQLPTTD Y
Arabidopsis Description
TIP1-1Aquaporin TIP1-1 [Source:UniProtKB/Swiss-Prot;Acc:P25818]
SUBAcon: [plasma membrane,golgi,vacuole]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.