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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:
  • nucleus 1
  • vacuole 4
  • endoplasmic reticulum 2
  • extracellular 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:nucleus, secretory
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:endoplasmic reticulum
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr1P01270_001
GSMUA_Achr2P10640_001
GSMUA_Achr4P26010_001
GSMUA_Achr5P19470_001
GSMUA_Achr6P05830_001
GSMUA_Achr8P12920_001
GSMUA_Achr9P28940_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G36830.1 GSMUA_Achr2P10640_001 AT1G73190.1 21798944
AT2G36830.1 GSMUA_Achr4P26010_001 AT1G73190.1 21798944
AT3G26520.1 GSMUA_Achr2P10640_001 AT1G73190.1 23163742
AT3G26520.1 GSMUA_Achr4P26010_001 AT1G73190.1 23163742
AT3G26520.1 GSMUA_Achr10P... AT3G16240.1 23163742
AT3G26520.1 GSMUA_Achr6P05830_001 AT3G16240.1 23163742
AT3G26520.1 GSMUA_Achr9P28940_001 AT3G16240.1 23163742
AT3G26520.1 GSMUA_Achr11P... AT3G26520.1 23163742
AT3G26520.1 GSMUA_Achr1P01270_001 AT3G26520.1 23163742
AT3G26520.1 GSMUA_Achr5P19470_001 AT3G26520.1 23163742
AT3G26520.1 GSMUA_Achr8P12920_001 AT3G26520.1 23163742
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr11P... Banana cytosol, extracellular, vacuole 88.05 88.4
GSMUA_Achr8P12920_001 Banana cytosol, plasma membrane, vacuole 85.66 86.0
GSMUA_Achr1P01270_001 Banana cytosol, plasma membrane, vacuole 82.47 82.8
EER92857 Sorghum cytosol 81.67 82.0
Os03t0146100-01 Rice nucleus 81.27 81.6
Zm00001d027652_P001 Maize plasma membrane 80.88 81.2
TraesCS4A01G410800.1 Wheat golgi, plasma membrane, vacuole 79.68 80.0
HORVU4Hr1G079230.1 Barley vacuole 79.28 79.6
TraesCS4B01G310900.1 Wheat unclear 79.28 79.6
CDY66645 Canola plastid 69.32 78.73
CDY67380 Canola plastid 69.32 78.73
VIT_08s0007g04780.t01 Wine grape cytosol 78.09 78.09
Bra017222.1-P Field mustard cytosol 77.69 77.69
Solyc06g074820.2.1 Tomato plastid 76.89 77.2
CDY53270 Canola plasma membrane 76.89 76.89
PGSC0003DMT400018375 Potato cytosol 76.49 76.8
TraesCS4D01G308800.1 Wheat golgi, plasma membrane, vacuole 78.09 76.26
AT2G36830.1 Thale cress golgi, plasma membrane, vacuole 75.7 75.7
KRH67767 Soybean mitochondrion 74.9 75.2
CDY13639 Canola plasma membrane 75.7 75.1
KRG96046 Soybean nucleus 74.5 74.8
CDX83623 Canola golgi, plasma membrane, plastid 75.3 74.7
Bra025210.1-P Field mustard plasma membrane 75.3 74.7
GSMUA_Achr6P15380_001 Banana cytosol, plasma membrane, vacuole 74.1 73.81
GSMUA_Achr10P... Banana plasma membrane 73.71 73.41
AT3G26520.1 Thale cress plasma membrane 73.71 73.12
Bra032937.1-P Field mustard plasma membrane 73.71 73.12
CDY28539 Canola plasma membrane 73.71 73.12
CDY48983 Canola plasma membrane 73.71 73.12
VIT_06s0061g00730.t01 Wine grape cytosol, plasma membrane, vacuole 70.52 70.52
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid, vacuole 58.96 60.91
GSMUA_Achr9P28940_001 Banana plasma membrane 59.36 60.82
GSMUA_Achr11P... Banana endoplasmic reticulum, plasma membrane 60.16 60.64
GSMUA_Achr11P... Banana extracellular, plasma membrane 59.76 60.24
GSMUA_Achr2P10640_001 Banana cytosol, golgi, plasma membrane 60.16 59.45
GSMUA_Achr6P05830_001 Banana endoplasmic reticulum, extracellular, plasma membrane 57.77 59.18
GSMUA_Achr4P26010_001 Banana cytosol, golgi, plasma membrane 58.96 58.27
GSMUA_Achr10P... Banana cytosol, plasma membrane, vacuole 52.99 53.41
GSMUA_Achr9P06260_001 Banana cytosol, golgi, plasma membrane 45.02 44.31
GSMUA_Achr1P13800_001 Banana cytosol 43.82 43.31
GSMUA_Achr4P24600_001 Banana golgi, plasma membrane, plastid 41.83 39.92
GSMUA_Achr11P... Banana extracellular 28.69 36.73
GSMUA_AchrUn_... Banana extracellular 28.29 36.41
GSMUA_Achr4P20780_001 Banana extracellular 28.29 36.22
GSMUA_Achr1P26390_001 Banana endoplasmic reticulum, extracellular, plasma membrane, plastid 28.29 35.86
GSMUA_Achr8P18910_001 Banana extracellular 27.49 35.2
GSMUA_Achr8P33980_001 Banana extracellular 27.89 35.18
GSMUA_Achr1P00370_001 Banana extracellular 25.9 34.21
GSMUA_Achr5P12400_001 Banana extracellular 25.5 33.68
GSMUA_Achr8P33990_001 Banana extracellular 26.29 33.33
GSMUA_Achr2P03980_001 Banana extracellular 25.1 33.16
GSMUA_AchrUn_... Banana extracellular 25.1 33.16
GSMUA_AchrUn_... Banana extracellular 25.1 33.16
GSMUA_AchrUn_... Banana extracellular 25.1 33.16
GSMUA_Achr8P11540_001 Banana extracellular 25.1 33.16
GSMUA_Achr5P11480_001 Banana plasma membrane 25.9 32.83
GSMUA_Achr10P... Banana plasma membrane 27.49 32.24
GSMUA_Achr11P... Banana extracellular 27.09 31.78
GSMUA_Achr1P07460_001 Banana extracellular 21.91 31.43
GSMUA_Achr1P02360_001 Banana unclear 32.67 29.08
GSMUA_Achr2P11190_001 Banana plasma membrane 32.27 28.83
GSMUA_Achr1P26380_001 Banana plasma membrane 31.87 28.47
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.3InterPro:Aquaporin-likeInterPro:Aquaporin_transptrGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0016021
GO:GO:0055085EnsemblPlantsGene:GSMUA_Achr5G19470_001EnsemblPlants:GSMUA_Achr5P19470_001EnsemblPlants:GSMUA_Achr5T19470_001InterPro:IPR023271UniProt:M0SZX6
InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221PANTHER:PTHR19139
PANTHER:PTHR19139:SF265SUPFAM:SSF81338TMHMM:TMhelixUniParc:UPI000294B775SEG:seg:
Description
Probable aquaporin TIP1-1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G19470_001]
Coordinates
chr5:+:21119271..21120100
Molecular Weight (calculated)
25689.2 Da
IEP (calculated)
5.879
GRAVY (calculated)
0.829
Length
251 amino acids
Sequence
(BLAST)
001: MPISRIAIGT TEEATHPSAL KAALAEFICT FIFVFAGQGS GMAYSKMTSG GAATPTGLIM AALAHAFALF VAVSVGANIS GGHVNPAVTF GAFVGGNITL
101: LRGVLYWVAQ LLGSTAACLL LHFATGGLET GTFGLSSGVG VWEALVLEAV MTFGLVYTVY ATAVDPRRGS LGAIAPIAIG FIVGANILVG GAFDGASMNP
201: AVSFGPALVS WSWTHQWVYW LGPLSGGALA GLVYEIFFIC STHEQLASAD Y
Best Arabidopsis Sequence Match ( AT2G36830.1 )
(BLAST)
001: MPIRNIAIGR PDEATRPDAL KAALAEFIST LIFVVAGSGS GMAFNKLTEN GATTPSGLVA AAVAHAFGLF VAVSVGANIS GGHVNPAVTF GAFIGGNITL
101: LRGILYWIAQ LLGSVVACLI LKFATGGLAV PAFGLSAGVG VLNAFVFEIV MTFGLVYTVY ATAIDPKNGS LGTIAPIAIG FIVGANILAG GAFSGASMNP
201: AVAFGPAVVS WTWTNHWVYW AGPLVGGGIA GLIYEVFFIN TTHEQLPTTD Y
Arabidopsis Description
TIP1-1Aquaporin TIP1-1 [Source:UniProtKB/Swiss-Prot;Acc:P25818]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.