Factsheet for GSMUA_Achr8P33990_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 3
nucleus 1
extracellular 3
plasma membrane 2
endoplasmic reticulum 1
vacuole 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P11480_001	Banana	plasma membrane	89.9	89.9
GSMUA_Achr8P33980_001	Banana	extracellular	89.9	89.45
GSMUA_Achr1P26390_001	Banana	endoplasmic reticulum, extracellular, plasma membrane, plastid	86.87	86.87
GSMUA_Achr11P...	Banana	extracellular	80.81	81.63
GSMUA_Achr8P18910_001	Banana	extracellular	80.3	81.12
GSMUA_Achr4P20780_001	Banana	extracellular	79.8	80.61
GSMUA_AchrUn_...	Banana	extracellular	76.77	77.95
GSMUA_Achr1P00370_001	Banana	extracellular	72.22	75.26
GSMUA_Achr8P11540_001	Banana	extracellular	72.22	75.26
GSMUA_AchrUn_...	Banana	extracellular	72.22	75.26
GSMUA_Achr2P03980_001	Banana	extracellular	71.72	74.74
GSMUA_Achr5P12400_001	Banana	extracellular	71.21	74.21
GSMUA_AchrUn_...	Banana	extracellular	71.21	74.21
GSMUA_AchrUn_...	Banana	extracellular	70.71	73.68
GSMUA_Achr1P07460_001	Banana	extracellular	64.65	73.14
GSMUA_Achr11P...	Banana	extracellular	72.22	66.82
GSMUA_Achr10P...	Banana	plasma membrane	71.72	66.36
GSMUA_Achr2P11190_001	Banana	plasma membrane	88.38	62.28
GSMUA_Achr1P02360_001	Banana	unclear	87.88	61.7
GSMUA_Achr1P26380_001	Banana	plasma membrane	76.77	54.09
GSMUA_Achr9P28940_001	Banana	plasma membrane	37.88	30.61
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid, vacuole	35.86	29.22
GSMUA_Achr4P26010_001	Banana	cytosol, golgi, plasma membrane	37.37	29.13
GSMUA_Achr6P05830_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	35.35	28.57
GSMUA_Achr2P10640_001	Banana	cytosol, golgi, plasma membrane	36.36	28.35
GSMUA_Achr10P...	Banana	plasma membrane	35.86	28.17
GSMUA_Achr11P...	Banana	extracellular, plasma membrane	34.85	27.71
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plasma membrane	34.85	27.71
GSMUA_Achr1P01270_001	Banana	cytosol, plasma membrane, vacuole	34.34	27.2
GSMUA_Achr6P15380_001	Banana	cytosol, plasma membrane, vacuole	33.84	26.59
GSMUA_Achr8P12920_001	Banana	cytosol, plasma membrane, vacuole	33.33	26.4
GSMUA_Achr5P19470_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	33.33	26.29
GSMUA_Achr11P...	Banana	cytosol, extracellular, vacuole	32.83	26.0
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, vacuole	32.32	25.7
GSMUA_Achr4P24600_001	Banana	golgi, plasma membrane, plastid	32.83	24.71
GSMUA_Achr1P13800_001	Banana	cytosol	29.8	23.23
GSMUA_Achr9P06260_001	Banana	cytosol, golgi, plasma membrane	29.8	23.14

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.2	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr8G33990_001	EnsemblPlants:GSMUA_Achr8P33990_001	EnsemblPlants:GSMUA_Achr8T33990_001	InterPro:IPR023271	UniProt:M0TW01
InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF260	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI00029569A9	:

Description

Aquaporin PIP-type [Source:GMGC_GENE;Acc:GSMUA_Achr8G33990_001]

Coordinates

chr8:+:34900972..34902313

Molecular Weight (calculated)

20905.8 Da

IEP (calculated)

10.447

GRAVY (calculated)

0.602

Length

198 amino acids

Sequence
(BLAST)

001: MIFILVYCTA GISGGHINPA VTLGLFLARK VSLLRAVMYM VAQCLGAICG VGIVKGIMKH QFNAFGGGAN SVAAGYSKGT AFGAESIGTF VLVYTVLSAT
101: DPKRSARDSH VPVLAPLPIG FAVFMVHLAT IPITGTGINP ARSFGAAVIY NQHKPWHDHW IFWVGPFVGA LAAAVYHQYV LRAAALKALG SFRSSRSN

Best Arabidopsis Sequence Match ( AT2G16850.1 )
(BLAST)

001: MSKEVSEEGR HGKDYVDPPP APLLDMAELK LWSFYRAIIA EFIATLLFLY VTVATVIGHK NQTGPCGGVG LLGIAWAFGG MIFVLVYCTA GISGGHINPA
101: VTFGLFLARK VSLPRAVAYM VAQCLGAICG VGLVKAFMMT PYKRLGGGAN TVADGYSTGT ALGAEIIGTF VLVYTVFSAT DPKRSARDSH VPVLAPLPIG
201: FAVFMVHLAT IPITGTGINP ARSFGAAVIY NNEKAWDDHW IFWVGPFVGA LAAAAYHQYI LRAAAIKALA SFRSNPTN

Arabidopsis Description

PIP2-8Probable aquaporin PIP2-8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVX8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.