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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • vacuole 3
  • endoplasmic reticulum 2
  • extracellular 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:endoplasmic reticulum
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr2P10640_001
GSMUA_Achr4P10230_001
GSMUA_Achr4P26010_001
GSMUA_Achr6P05830_001
GSMUA_Achr9P28940_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G16240.1 GSMUA_Achr2P10640_001 AT1G73190.1 23163742
AT3G16240.1 GSMUA_Achr4P26010_001 AT1G73190.1 23163742
AT3G16240.1 GSMUA_Achr10P... AT3G16240.1 23163742
AT3G16240.1 GSMUA_Achr6P05830_001 AT3G16240.1 23163742
AT3G16240.1 GSMUA_Achr9P28940_001 AT3G16240.1 23163742
AT3G16240.1 GSMUA_Achr4P10230_001 AT4G19030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr6P05830_001 Banana endoplasmic reticulum, extracellular, plasma membrane 93.06 93.06
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid, vacuole 86.94 87.65
PGSC0003DMT400042613 Potato cytosol, extracellular, plasma membrane 82.86 81.53
KRG93712 Soybean plasma membrane, vacuole 78.37 81.01
KRH09912 Soybean endoplasmic reticulum, plasma membrane, vacuole 81.22 80.57
Os06t0336200-01 Rice nucleus 81.22 80.24
KRH23420 Soybean plasma membrane, vacuole 80.41 79.76
EER89797 Sorghum plasma membrane 80.41 79.44
TraesCS7A01G331300.1 Wheat unclear 80.0 79.03
Bra001626.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 80.0 78.71
HORVU7Hr1G081770.8 Barley plasma membrane 80.0 78.71
CDY63821 Canola endoplasmic reticulum, plasma membrane, vacuole 80.0 78.71
CDX82410 Canola plasma membrane 80.0 78.71
TraesCS7B01G243000.1 Wheat plasma membrane 79.59 78.63
CDY20190 Canola endoplasmic reticulum, plasma membrane, vacuole 79.59 78.31
Solyc12g044330.1.1 Tomato plastid 79.18 78.23
KRH47241 Soybean mitochondrion 79.18 78.23
KRH44312 Soybean extracellular 79.18 78.23
CDX97733 Canola endoplasmic reticulum, extracellular 78.78 77.82
Bra027181.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 78.78 77.82
CDY30146 Canola endoplasmic reticulum, extracellular, plasma membrane 78.37 77.42
PGSC0003DMT400068047 Potato cytosol, extracellular, plastid, vacuole 77.96 77.02
Bra021171.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 65.71 76.67
AT3G16240.1 Thale cress plasma membrane 77.96 76.4
PGSC0003DMT400006558 Potato endoplasmic reticulum, plasma membrane 76.73 75.5
VIT_09s0002g04020.t01 Wine grape plasma membrane, vacuole 76.33 75.1
GSMUA_Achr11P... Banana extracellular, plasma membrane 75.1 73.9
Solyc06g066560.1.1 Tomato mitochondrion 80.82 72.53
GSMUA_Achr11P... Banana endoplasmic reticulum, plasma membrane 73.06 71.89
CDX75873 Canola extracellular, golgi, vacuole 80.0 71.27
TraesCS7D01G339600.1 Wheat plasma membrane 78.78 69.18
CDY47816 Canola endoplasmic reticulum, plasma membrane, vacuole 71.43 69.17
GSMUA_Achr8P12920_001 Banana cytosol, plasma membrane, vacuole 66.12 64.8
GSMUA_Achr1P01270_001 Banana cytosol, plasma membrane, vacuole 63.67 62.4
GSMUA_Achr11P... Banana cytosol, extracellular, vacuole 63.67 62.4
GSMUA_Achr10P... Banana plasma membrane 62.45 60.71
GSMUA_Achr5P19470_001 Banana endoplasmic reticulum, plasma membrane, vacuole 60.82 59.36
GSMUA_Achr6P15380_001 Banana cytosol, plasma membrane, vacuole 60.41 58.73
GSMUA_Achr10P... Banana cytosol, plasma membrane, vacuole 54.69 53.82
GSMUA_Achr2P10640_001 Banana cytosol, golgi, plasma membrane 55.51 53.54
GSMUA_Achr4P26010_001 Banana cytosol, golgi, plasma membrane 54.29 52.36
GSMUA_Achr4P24600_001 Banana golgi, plasma membrane, plastid 48.98 45.63
GSMUA_Achr11P... Banana extracellular 33.06 41.33
GSMUA_Achr4P20780_001 Banana extracellular 32.24 40.31
GSMUA_Achr9P06260_001 Banana cytosol, golgi, plasma membrane 41.63 40.0
GSMUA_Achr8P33980_001 Banana extracellular 32.24 39.7
GSMUA_AchrUn_... Banana extracellular 31.43 39.49
GSMUA_Achr1P00370_001 Banana extracellular 30.2 38.95
GSMUA_Achr2P03980_001 Banana extracellular 30.2 38.95
GSMUA_Achr8P18910_001 Banana extracellular 31.02 38.78
GSMUA_Achr1P13800_001 Banana cytosol 40.0 38.58
GSMUA_Achr8P11540_001 Banana extracellular 29.8 38.42
GSMUA_AchrUn_... Banana extracellular 29.39 37.89
GSMUA_Achr5P12400_001 Banana extracellular 29.39 37.89
GSMUA_Achr8P33990_001 Banana extracellular 30.61 37.88
GSMUA_Achr1P26390_001 Banana endoplasmic reticulum, extracellular, plasma membrane, plastid 30.61 37.88
GSMUA_Achr5P11480_001 Banana plasma membrane 30.2 37.37
GSMUA_AchrUn_... Banana extracellular 28.98 37.37
GSMUA_AchrUn_... Banana extracellular 28.98 37.37
GSMUA_Achr1P07460_001 Banana extracellular 25.71 36.0
GSMUA_Achr11P... Banana extracellular 29.8 34.11
GSMUA_Achr10P... Banana plasma membrane 29.8 34.11
GSMUA_Achr1P02360_001 Banana unclear 36.73 31.91
GSMUA_Achr2P11190_001 Banana plasma membrane 36.33 31.67
GSMUA_Achr1P26380_001 Banana plasma membrane 35.51 30.96
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.3InterPro:Aquaporin-likeInterPro:Aquaporin_transptrGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0016021
GO:GO:0055085EnsemblPlantsGene:GSMUA_Achr9G28940_001EnsemblPlants:GSMUA_Achr9P28940_001EnsemblPlants:GSMUA_Achr9T28940_001InterPro:IPR023271UniProt:M0U4F1
InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221PANTHER:PTHR19139
PANTHER:PTHR19139:SF257SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelixUniParc:UPI00029669DE:
Description
Probable aquaporin TIP2-2 [Source:GMGC_GENE;Acc:GSMUA_Achr9G28940_001]
Coordinates
chr9:+:32753332..32756023
Molecular Weight (calculated)
24731.1 Da
IEP (calculated)
4.933
GRAVY (calculated)
0.879
Length
245 amino acids
Sequence
(BLAST)
001: MAGIAFGQFD DSFSVGTLKA YLAEFISTLL FVFAGVGSAI AYNKLTSSAA LDPAGLVAIA VCHGLALFVA VSVGANISGG HVNPAVTFGL ALGGQITILT
101: GIFYWVAQLL GAVVGAFLVK FATGLDTPTH GLGDGVGAGE AVVMEIIITF ALVYTVYATA ADPKKGSLGT IAPIAIGFIV GANILAAGPF SGGSMNPARS
201: FGPAVASGNF SDLWIYWVGP LIGGGIAGLV YTYAYMCSDH QPLPQ
Best Arabidopsis Sequence Match ( AT3G16240.1 )
(BLAST)
001: MAGVAFGSFD DSFSLASLRA YLAEFISTLL FVFAGVGSAI AYAKLTSDAA LDTPGLVAIA VCHGFALFVA VAIGANISGG HVNPAVTFGL AVGGQITVIT
101: GVFYWIAQLL GSTAACFLLK YVTGGLAVPT HSVAAGLGSI EGVVMEIIIT FALVYTVYAT AADPKKGSLG TIAPLAIGLI VGANILAAGP FSGGSMNPAR
201: SFGPAVAAGD FSGHWVYWVG PLIGGGLAGL IYGNVFMGSS EHVPLASADF
Arabidopsis Description
TIP2-1Aquaporin TIP2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q41951]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.