Factsheet for Bra027181.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97733	Canola	endoplasmic reticulum, extracellular	99.6	99.6
Bra021171.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	79.84	94.29
Bra001626.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	93.95	93.57
Solyc12g044330.1.1	Tomato	plastid	81.45	81.45
KRH09912	Soybean	endoplasmic reticulum, plasma membrane, vacuole	81.05	81.38
KRH23420	Soybean	plasma membrane, vacuole	79.44	79.76
KRG93712	Soybean	plasma membrane, vacuole	75.81	79.32
GSMUA_Achr6P05830_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	78.23	79.18
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid, vacuole	77.42	79.01
GSMUA_Achr9P28940_001	Banana	plasma membrane	77.82	78.78
PGSC0003DMT400006558	Potato	endoplasmic reticulum, plasma membrane	78.23	77.91
VIT_09s0002g04020.t01	Wine grape	plasma membrane, vacuole	75.4	75.1
Os06t0336200-01	Rice	nucleus	75.0	75.0
EER89797	Sorghum	plasma membrane	74.6	74.6
Solyc06g066560.1.1	Tomato	mitochondrion	81.45	73.99
HORVU7Hr1G081770.8	Barley	plasma membrane	73.79	73.49
TraesCS7A01G331300.1	Wheat	unclear	73.39	73.39
TraesCS7B01G243000.1	Wheat	plasma membrane	73.39	73.39
Bra026245.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	73.39	72.8
Bra024943.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	72.58	71.71
Bra022131.1-P	Field mustard	extracellular	58.87	71.57
TraesCS7D01G339600.1	Wheat	plasma membrane	73.79	65.59
Bra032937.1-P	Field mustard	plasma membrane	63.71	62.45
Bra025210.1-P	Field mustard	plasma membrane	62.5	61.26
Bra017222.1-P	Field mustard	cytosol	61.69	60.96
Bra037415.1-P	Field mustard	cytosol	58.06	57.14
Bra034271.1-P	Field mustard	cytosol, plasma membrane, vacuole	51.61	51.41
Bra016014.1-P	Field mustard	cytosol	54.03	50.57
Bra008079.1-P	Field mustard	golgi, mitochondrion, plasma membrane	53.63	50.0
Bra025947.1-P	Field mustard	cytosol, golgi, plasma membrane	52.42	48.69
Bra031005.1-P	Field mustard	golgi, mitochondrion, plasma membrane	52.42	48.69
Bra018148.1-P	Field mustard	extracellular, plasma membrane, plastid	42.34	41.18
Bra005216.1-P	Field mustard	cytosol, golgi, plasma membrane	33.06	35.5
Bra020238.1-P	Field mustard	plasma membrane	39.52	34.63
Bra006650.1-P	Field mustard	plasma membrane	39.11	34.04
Bra023102.1-P	Field mustard	plasma membrane	38.71	33.92
Bra011585.1-P	Field mustard	plasma membrane	38.31	33.81
Bra006997.1-P	Field mustard	plasma membrane	39.11	33.8
Bra023103.1-P	Field mustard	plasma membrane	38.71	33.68
Bra034675.1-P	Field mustard	cytosol, peroxisome, plasma membrane	37.9	33.45
Bra017697.1-P	Field mustard	cytosol	37.9	33.45
Bra003196.1-P	Field mustard	plasma membrane	38.31	33.22
Bra002462.1-P	Field mustard	cytosol	34.68	33.08
Bra000111.1-P	Field mustard	plasma membrane	38.31	32.99
Bra007100.1-P	Field mustard	plasma membrane	37.9	32.87
Bra005215.1-P	Field mustard	cytosol, peroxisome, plasma membrane	30.65	31.93
Bra004950.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.29	31.47
Bra032644.1-P	Field mustard	plasma membrane	36.29	31.47
Bra019307.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.29	31.36
Bra000974.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.29	31.25
Bra007603.1-P	Field mustard	plasma membrane	35.89	31.12
Bra014437.1-P	Field mustard	plasma membrane	35.89	31.12
Bra033248.1-P	Field mustard	cytosol, peroxisome, plasma membrane	35.89	31.12
Bra039301.1-P	Field mustard	cytosol, peroxisome, plasma membrane	31.85	28.21

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.3	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlantsGene:Bra027181	EnsemblPlants:Bra027181.1
EnsemblPlants:Bra027181.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	UniProt:M4EEG9
InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF257	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI0001B34E54	SEG:seg

Description

AT3G16240 (E=6e-116) DELTA-TIP, TIP2;1, DELTA-TIP1, AQP1, ATTIP2;1 | DELTA-TIP; ammonia transporter/ methylammonium transmembrane transporter/ water channel

Coordinates

chrA05:-:19558433..19559926

Molecular Weight (calculated)

24858.2 Da

IEP (calculated)

5.430

GRAVY (calculated)

0.967

Length

248 amino acids

Sequence
(BLAST)

001: MAGVAFGSFD DSFSLASLRA YLAEFISTLL FVFAGVGSAI AYAKLTSDAA LDTPGLVAIA VCHGFALFVA VAVGANISGG HVNPAVTFGL AVGGQITLIT
101: GVFYWVAQLL GSTAACFLLK YVTGGLAVPT HSVAAGVGAI EGVVMEIIIT FALVYTVYAT AADPKKGSLG TIAPLAIGLI VGANILAAGP FSGGSMNPAR
201: SFGPAVAAGD FSGHWVYWVG PLIGGGLAGI TYGNVFMTSE HVPLASDF

Best Arabidopsis Sequence Match ( AT3G16240.1 )
(BLAST)

001: MAGVAFGSFD DSFSLASLRA YLAEFISTLL FVFAGVGSAI AYAKLTSDAA LDTPGLVAIA VCHGFALFVA VAIGANISGG HVNPAVTFGL AVGGQITVIT
101: GVFYWIAQLL GSTAACFLLK YVTGGLAVPT HSVAAGLGSI EGVVMEIIIT FALVYTVYAT AADPKKGSLG TIAPLAIGLI VGANILAAGP FSGGSMNPAR
201: SFGPAVAAGD FSGHWVYWVG PLIGGGLAGL IYGNVFMGSS EHVPLASADF

Arabidopsis Description

TIP2-1Aquaporin TIP2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q41951]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.