Factsheet for Bra037415.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
vacuole 3
cytosol 2
extracellular 1
golgi 1
plasma membrane 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69446	Canola	cytosol	100.0	100.0
CDY07142	Canola	cytosol	100.0	100.0
AT4G01470.1	Thale cress	cytosol, golgi, plasma membrane	96.83	96.83
KRH70511	Soybean	cytosol	84.13	84.13
KRH01591	Soybean	cytosol	83.33	83.33
VIT_13s0019g00330.t01	Wine grape	cytosol, plasma membrane, vacuole	80.95	81.27
KRH36204	Soybean	cytosol, extracellular, mitochondrion, plasma membrane	80.56	80.56
KRG90553	Soybean	extracellular	69.44	72.02
Bra017222.1-P	Field mustard	cytosol	71.43	71.71
Bra025210.1-P	Field mustard	plasma membrane	71.03	70.75
Bra032937.1-P	Field mustard	plasma membrane	69.44	69.17
Bra021171.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	49.6	59.52
Bra001626.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	57.54	58.23
Bra027181.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	57.14	58.06
Bra008079.1-P	Field mustard	golgi, mitochondrion, plasma membrane	59.13	56.02
Bra016014.1-P	Field mustard	cytosol	58.73	55.85
Bra022131.1-P	Field mustard	extracellular	44.44	54.9
Bra031005.1-P	Field mustard	golgi, mitochondrion, plasma membrane	56.75	53.56
Bra026245.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	52.78	53.2
Bra025947.1-P	Field mustard	cytosol, golgi, plasma membrane	56.35	53.18
Bra024943.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	52.38	52.59
Bra034271.1-P	Field mustard	cytosol, plasma membrane, vacuole	48.41	49.0
Bra018148.1-P	Field mustard	extracellular, plasma membrane, plastid	37.7	37.25
Bra005216.1-P	Field mustard	cytosol, golgi, plasma membrane	33.73	36.8
Bra002462.1-P	Field mustard	cytosol	34.92	33.85
Bra020238.1-P	Field mustard	plasma membrane	36.9	32.86
Bra023102.1-P	Field mustard	plasma membrane	36.9	32.86
Bra023103.1-P	Field mustard	plasma membrane	36.9	32.63
Bra006650.1-P	Field mustard	plasma membrane	36.9	32.63
Bra006997.1-P	Field mustard	plasma membrane	36.9	32.4
Bra011585.1-P	Field mustard	plasma membrane	35.71	32.03
Bra017697.1-P	Field mustard	cytosol	35.71	32.03
Bra000111.1-P	Field mustard	plasma membrane	36.51	31.94
Bra005215.1-P	Field mustard	cytosol, peroxisome, plasma membrane	29.76	31.51
Bra007100.1-P	Field mustard	plasma membrane	35.71	31.47
Bra034675.1-P	Field mustard	cytosol, peroxisome, plasma membrane	34.92	31.32
Bra003196.1-P	Field mustard	plasma membrane	35.32	31.12
Bra014437.1-P	Field mustard	plasma membrane	34.52	30.42
Bra004950.1-P	Field mustard	cytosol, peroxisome, plasma membrane	34.52	30.42
Bra032644.1-P	Field mustard	plasma membrane	34.13	30.07
Bra007603.1-P	Field mustard	plasma membrane	34.13	30.07
Bra019307.1-P	Field mustard	cytosol, peroxisome, plasma membrane	34.13	29.97
Bra000974.1-P	Field mustard	cytosol, peroxisome, plasma membrane	34.13	29.86
Bra033248.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.73	29.72
Bra039301.1-P	Field mustard	cytosol, peroxisome, plasma membrane	30.95	27.86

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.3	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlantsGene:Bra037415	EnsemblPlants:Bra037415.1
EnsemblPlants:Bra037415.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006833
GO:GO:0008150	GO:GO:0015204	GO:GO:0015250	GO:GO:0015267	GO:GO:0015840	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	GO:GO:0071918	InterPro:IPR023271	UniProt:M4F8K3	InterPro:MIP
InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF151
SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI0001B63AF4	SEG:seg	:	:

Description

AT4G01470 (E=1e-118) GAMMA-TIP3, TIP1;3 | TIP1;3 (TONOPLAST INTRINSIC PROTEIN 1;3); urea transmembrane transporter/ water channel

Coordinates

chrA09:+:629412..630170

Molecular Weight (calculated)

25858.4 Da

IEP (calculated)

5.469

GRAVY (calculated)

0.810

Length

252 amino acids

Sequence
(BLAST)

001: MAINRIAIGT PGEASGRDAI RAAFAEFFSM VIFVFAGQGS GMAYGKLTGD GPATPSGLVA ASLSHAFALF VAVSVGANVS GGHVNPAVTF GAFIGGNITL
101: LRAILYWIAQ LLGAVVACLL LKVSTGGMET AAFSLSHGVT PWNAVVFEIV MTFGLVYTVY ATAVDPKKGD IGIIAPLAIG LIVGANILVG GAFDGASMNP
201: AVSFGPAVVS WTWTNHWVYW VGPFIGAAIA AIVYDTIFID SNGHEPLPSS DF

Best Arabidopsis Sequence Match ( AT4G01470.1 )
(BLAST)

001: MPINRIAIGT PGEASRPDAI RAAFAEFFSM VIFVFAGQGS GMAYGKLTGD GPATPAGLVA ASLSHAFALF VAVSVGANVS GGHVNPAVTF GAFIGGNITL
101: LRAILYWIAQ LLGAVVACLL LKVSTGGMET AAFSLSYGVT PWNAVVFEIV MTFGLVYTVY ATAVDPKKGD IGIIAPLAIG LIVGANILVG GAFDGASMNP
201: AVSFGPAVVS WIWTNHWVYW VGPFIGAAIA AIVYDTIFIG SNGHEPLPSN DF

Arabidopsis Description

TIP1-3Aquaporin TIP1-3 [Source:UniProtKB/Swiss-Prot;Acc:O82598]
SUBAcon: [cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.