CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, extracellular, cytosol

Predictor Summary:

plastid 2
vacuole 3
extracellular 2
endoplasmic reticulum 1
plasma membrane 2
golgi 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, mitochondrion, plasma membrane
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	vacuole
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	vacuole
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70511	Soybean	cytosol	86.9	86.9
KRH01591	Soybean	cytosol	86.11	86.11
KRG90553	Soybean	extracellular	78.97	81.89
Bra037415.1-P	Field mustard	cytosol	80.56	80.56
CDY07142	Canola	cytosol	80.56	80.56
CDY69446	Canola	cytosol	80.56	80.56
AT4G01470.1	Thale cress	cytosol, golgi, plasma membrane	80.56	80.56
VIT_13s0019g00330.t01	Wine grape	cytosol, plasma membrane, vacuole	77.38	77.69
KRH10300	Soybean	endoplasmic reticulum, extracellular	49.21	77.5
KRH29856	Soybean	cytosol, plasma membrane, vacuole	73.81	73.81
KRH23017	Soybean	cytosol, plasma membrane, vacuole	73.02	73.02
KRH24847	Soybean	endoplasmic reticulum, plasma membrane, vacuole	69.05	71.02
KRH67767	Soybean	mitochondrion	65.87	66.4
KRG96046	Soybean	nucleus	64.68	65.2
KRH19959	Soybean	mitochondrion	59.52	60.0
KRH09912	Soybean	endoplasmic reticulum, plasma membrane, vacuole	55.16	56.28
KRG93712	Soybean	plasma membrane, vacuole	52.38	55.7
KRH44312	Soybean	extracellular	54.76	55.65
KRH47241	Soybean	mitochondrion	54.76	55.65
KRH23420	Soybean	plasma membrane, vacuole	54.37	55.47
KRH77347	Soybean	mitochondrion	53.57	54.22
KRH28112	Soybean	mitochondrion	51.59	52.21
KRH34280	Soybean	endoplasmic reticulum	52.38	51.97
KRH38823	Soybean	nucleus	51.98	51.37
KRG92517	Soybean	cytosol	50.79	50.39
KRH09321	Soybean	cytosol, mitochondrion, plasma membrane	50.79	50.2
KRH52727	Soybean	cytosol	47.62	48.78
KRH62059	Soybean	cytosol, plasma membrane, vacuole	47.62	48.78
KRH23943	Soybean	plasma membrane	29.37	40.44
KRH39857	Soybean	plastid	37.7	37.7
KRH16406	Soybean	extracellular	20.24	33.33
KRH22889	Soybean	golgi, peroxisome, plasma membrane	37.3	32.75
KRH26410	Soybean	golgi, peroxisome, plasma membrane	36.9	32.4
KRG91899	Soybean	plasma membrane	35.71	31.69
KRH70183	Soybean	mitochondrion	35.71	31.58
KRH60692	Soybean	mitochondrion	34.13	31.27
KRG95980	Soybean	plasma membrane	35.32	31.23
KRH70184	Soybean	plasma membrane	35.32	31.23
KRH08523	Soybean	plasma membrane	35.32	31.23
KRH08522	Soybean	plasma membrane	35.32	31.23
KRH67688	Soybean	plasma membrane	35.32	31.12
KRH51390	Soybean	plasma membrane	33.73	30.58
KRH29919	Soybean	mitochondrion	34.52	30.42
KRH25011	Soybean	mitochondrion	34.52	30.42
KRH34875	Soybean	plasma membrane	35.32	30.07
KRH00178	Soybean	golgi, peroxisome, plasma membrane	32.94	28.92
KRG97766	Soybean	endoplasmic reticulum, extracellular, mitochondrion, plasma membrane	15.08	28.36
KRH66037	Soybean	golgi, peroxisome, plasma membrane	31.35	27.82
KRH27918	Soybean	plasma membrane	31.35	27.62
KRH77555	Soybean	plasma membrane	31.35	27.62
KRH59918	Soybean	peroxisome	31.35	27.53
KRH41192	Soybean	endoplasmic reticulum	31.35	27.34
KRH14983	Soybean	mitochondrion	30.95	26.99
KRH31119	Soybean	endoplasmic reticulum	30.95	26.99
KRH73156	Soybean	golgi, peroxisome, plasma membrane	30.95	24.45
KRH75838	Soybean	golgi, peroxisome, plasma membrane	31.35	21.76

Protein Annotations

Gene3D:1.20.1080.10	EntrezGene:100818197	MapMan:24.3.1.3	EMBL:ACUP02006721	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr
EnsemblPlantsGene:GLYMA_10G290600	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833
GO:GO:0008150	GO:GO:0009705	GO:GO:0015250	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021
GO:GO:0034220	GO:GO:0042807	GO:GO:0055085	UniProt:I1LFD1	InterPro:IPR023271	EnsemblPlants:KRH36204
ProteinID:KRH36204	ProteinID:KRH36204.1	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783
ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF151	SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI000233D68D

Description

hypothetical protein

Coordinates

chr10:-:50868634..50870171

Molecular Weight (calculated)

26019.6 Da

IEP (calculated)

6.502

GRAVY (calculated)

0.742

Length

252 amino acids

Sequence
(BLAST)

001: MAVYRIAIGS PREASNPAAI RAAFAEFFSM LIFVFAGQGS GMAYSKLTGN GPATPGGLVV ASLSHTFGLF VAVAVGANIS GGHVNPAVTF GAFIGGNITL
101: LRSILYWIAQ LLGSVVACIL LKVATGGMET SAFSLSSGVS VWNALVFEIV MTFGLVHTVY ATTVDPKKGN VGVIGPIAIG SIVGANILVG GAFDGASMNP
201: AVCFGPALIN WSWTHHWVYW LGPFIGSATA AILYDNIFIG DDGHEPLSNS DF

Best Arabidopsis Sequence Match ( AT4G01470.1 )
(BLAST)

001: MPINRIAIGT PGEASRPDAI RAAFAEFFSM VIFVFAGQGS GMAYGKLTGD GPATPAGLVA ASLSHAFALF VAVSVGANVS GGHVNPAVTF GAFIGGNITL
101: LRAILYWIAQ LLGAVVACLL LKVSTGGMET AAFSLSYGVT PWNAVVFEIV MTFGLVYTVY ATAVDPKKGD IGIIAPLAIG LIVGANILVG GAFDGASMNP
201: AVSFGPAVVS WIWTNHWVYW VGPFIGAAIA AIVYDTIFIG SNGHEPLPSN DF

Arabidopsis Description

TIP1-3Aquaporin TIP1-3 [Source:UniProtKB/Swiss-Prot;Acc:O82598]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.