Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 5
- plastid 2
- cytosol 1
- extracellular 2
- endoplasmic reticulum 2
- plasma membrane 3
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH23420 | Soybean | plasma membrane, vacuole | 98.31 | 94.33 |
| KRH09912 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 97.05 | 93.12 |
| KRH44312 | Soybean | extracellular | 88.61 | 84.68 |
| KRH47241 | Soybean | mitochondrion | 88.61 | 84.68 |
| GSMUA_Achr6P05830_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 82.7 | 80.0 |
| GSMUA_Achr9P28940_001 | Banana | plasma membrane | 81.01 | 78.37 |
| CDX82410 | Canola | plasma membrane | 81.43 | 77.51 |
| Bra001626.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 81.01 | 77.11 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane, plastid, vacuole | 78.9 | 76.95 |
| CDY63821 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 80.59 | 76.71 |
| CDY20190 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 80.17 | 76.31 |
| CDX97733 | Canola | endoplasmic reticulum, extracellular | 79.32 | 75.81 |
| Bra027181.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 79.32 | 75.81 |
| AT3G16240.1 | Thale cress | plasma membrane | 79.75 | 75.6 |
| CDY30146 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 78.9 | 75.4 |
| Bra021171.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 66.67 | 75.24 |
| Os06t0336200-01 | Rice | nucleus | 77.64 | 74.19 |
| EER89797 | Sorghum | plasma membrane | 77.22 | 73.79 |
| TraesCS7A01G331300.1 | Wheat | unclear | 77.22 | 73.79 |
| TraesCS7B01G243000.1 | Wheat | plasma membrane | 76.79 | 73.39 |
| HORVU7Hr1G081770.8 | Barley | plasma membrane | 76.79 | 73.09 |
| PGSC0003DMT400006558 | Potato | endoplasmic reticulum, plasma membrane | 75.53 | 71.89 |
| KRH28112 | Soybean | mitochondrion | 75.53 | 71.89 |
| KRH77347 | Soybean | mitochondrion | 75.11 | 71.49 |
| VIT_09s0002g04020.t01 | Wine grape | plasma membrane, vacuole | 74.68 | 71.08 |
| CDX75873 | Canola | extracellular, golgi, vacuole | 81.86 | 70.55 |
| CDY47816 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 74.26 | 69.57 |
| TraesCS7D01G339600.1 | Wheat | plasma membrane | 75.53 | 64.16 |
| KRH10300 | Soybean | endoplasmic reticulum, extracellular | 41.77 | 61.88 |
| KRH67767 | Soybean | mitochondrion | 64.98 | 61.6 |
| KRG96046 | Soybean | nucleus | 64.14 | 60.8 |
| KRH29856 | Soybean | cytosol, plasma membrane, vacuole | 63.71 | 59.92 |
| KRH24847 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 61.6 | 59.59 |
| KRH23017 | Soybean | cytosol, plasma membrane, vacuole | 61.6 | 57.94 |
| KRH70511 | Soybean | cytosol | 57.81 | 54.37 |
| KRH19959 | Soybean | mitochondrion | 56.96 | 54.0 |
| KRH01591 | Soybean | cytosol | 56.96 | 53.57 |
| KRH36204 | Soybean | cytosol, extracellular, mitochondrion, plasma membrane | 55.7 | 52.38 |
| KRH34280 | Soybean | endoplasmic reticulum | 55.7 | 51.97 |
| KRH62059 | Soybean | cytosol, plasma membrane, vacuole | 53.59 | 51.63 |
| KRH52727 | Soybean | cytosol | 53.59 | 51.63 |
| KRG92517 | Soybean | cytosol | 55.27 | 51.57 |
| KRH09321 | Soybean | cytosol, mitochondrion, plasma membrane | 53.16 | 49.41 |
| KRH38823 | Soybean | nucleus | 53.16 | 49.41 |
| KRG90553 | Soybean | extracellular | 48.1 | 46.91 |
| KRH23943 | Soybean | plasma membrane | 34.18 | 44.26 |
| KRH39857 | Soybean | plastid | 44.73 | 42.06 |
| KRH60692 | Soybean | mitochondrion | 40.93 | 35.27 |
| KRG91899 | Soybean | plasma membrane | 41.35 | 34.51 |
| KRH26410 | Soybean | golgi, peroxisome, plasma membrane | 41.77 | 34.49 |
| KRH22889 | Soybean | golgi, peroxisome, plasma membrane | 41.77 | 34.49 |
| KRH16406 | Soybean | extracellular | 21.94 | 33.99 |
| KRH29919 | Soybean | mitochondrion | 40.93 | 33.92 |
| KRH25011 | Soybean | mitochondrion | 40.93 | 33.92 |
| KRH51390 | Soybean | plasma membrane | 39.66 | 33.81 |
| KRG97766 | Soybean | endoplasmic reticulum, extracellular, mitochondrion, plasma membrane | 18.99 | 33.58 |
| KRH70184 | Soybean | plasma membrane | 39.66 | 32.98 |
| KRH70183 | Soybean | mitochondrion | 39.66 | 32.98 |
| KRG95980 | Soybean | plasma membrane | 39.66 | 32.98 |
| KRH34875 | Soybean | plasma membrane | 40.93 | 32.77 |
| KRH08522 | Soybean | plasma membrane | 39.24 | 32.63 |
| KRH08523 | Soybean | plasma membrane | 39.24 | 32.63 |
| KRH67688 | Soybean | plasma membrane | 39.24 | 32.52 |
| KRH66037 | Soybean | golgi, peroxisome, plasma membrane | 36.71 | 30.63 |
| KRH00178 | Soybean | golgi, peroxisome, plasma membrane | 36.71 | 30.31 |
| KRH31119 | Soybean | endoplasmic reticulum | 36.71 | 30.1 |
| KRH27918 | Soybean | plasma membrane | 36.29 | 30.07 |
| KRH14983 | Soybean | mitochondrion | 36.29 | 29.76 |
| KRH59918 | Soybean | peroxisome | 35.87 | 29.62 |
| KRH41192 | Soybean | endoplasmic reticulum | 35.87 | 29.41 |
| KRH77555 | Soybean | plasma membrane | 35.44 | 29.37 |
| KRH73156 | Soybean | golgi, peroxisome, plasma membrane | 36.71 | 27.27 |
| KRH75838 | Soybean | golgi, peroxisome, plasma membrane | 36.71 | 23.97 |
Protein Annotations
| Gene3D:1.20.1080.10 | EntrezGene:100777964 | MapMan:24.3.1.3 | EMBL:ACUP02011615 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr |
| EnsemblPlantsGene:GLYMA_19G035400 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005886 | GO:GO:0005887 | GO:GO:0006810 | GO:GO:0006833 |
| GO:GO:0008150 | GO:GO:0009705 | GO:GO:0015250 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0034220 | GO:GO:0042807 | GO:GO:0055085 | UniProt:I1N6F6 | InterPro:IPR023271 | EnsemblPlants:KRG93712 |
| ProteinID:KRG93712 | ProteinID:KRG93712.1 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 |
| ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF257 | SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix |
| UniParc:UPI000233E1B7 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr19:+:4657558..4658763
Molecular Weight (calculated)
24079.4 Da
IEP (calculated)
5.951
GRAVY (calculated)
0.969
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGIAFGNFN DSVSFASIKA YIAEFISTLL FVFAGVGSAI AYAKLTSDAA LDPTGLVAVA ICHGFALFVA VSVGANISGG HVNPAVTFGL ALGGHITILT
101: GLFYWIAQLL GSIVASLLLK FVTGYDTPIH SVAAGIGAGE GVVTEIIITF GLVYTVYATT ADPKKGSLGT IAPIAIGFIV GANILAAGPF SGGSMNPARS
201: FGPAVVSGDF HDNWIYWVGT LIGGGLAGLI YTYAFIM
101: GLFYWIAQLL GSIVASLLLK FVTGYDTPIH SVAAGIGAGE GVVTEIIITF GLVYTVYATT ADPKKGSLGT IAPIAIGFIV GANILAAGPF SGGSMNPARS
201: FGPAVVSGDF HDNWIYWVGT LIGGGLAGLI YTYAFIM
001: MAGVAFGSFD DSFSLASLRA YLAEFISTLL FVFAGVGSAI AYAKLTSDAA LDTPGLVAIA VCHGFALFVA VAIGANISGG HVNPAVTFGL AVGGQITVIT
101: GVFYWIAQLL GSTAACFLLK YVTGGLAVPT HSVAAGLGSI EGVVMEIIIT FALVYTVYAT AADPKKGSLG TIAPLAIGLI VGANILAAGP FSGGSMNPAR
201: SFGPAVAAGD FSGHWVYWVG PLIGGGLAGL IYGNVFMGSS EHVPLASADF
101: GVFYWIAQLL GSTAACFLLK YVTGGLAVPT HSVAAGLGSI EGVVMEIIIT FALVYTVYAT AADPKKGSLG TIAPLAIGLI VGANILAAGP FSGGSMNPAR
201: SFGPAVAAGD FSGHWVYWVG PLIGGGLAGL IYGNVFMGSS EHVPLASADF
Arabidopsis Description
TIP2-1Aquaporin TIP2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q41951]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.