Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
mitochondrion:
28499913
|
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH31119 | Soybean | endoplasmic reticulum | 91.35 | 91.35 |
| KRH73156 | Soybean | golgi, peroxisome, plasma membrane | 98.62 | 89.34 |
| KRH66037 | Soybean | golgi, peroxisome, plasma membrane | 84.08 | 85.56 |
| KRH27918 | Soybean | plasma membrane | 83.39 | 84.27 |
| KRH59918 | Soybean | peroxisome | 83.39 | 83.97 |
| KRH77555 | Soybean | plasma membrane | 83.05 | 83.92 |
| KRH41192 | Soybean | endoplasmic reticulum | 83.39 | 83.39 |
| KRH00178 | Soybean | golgi, peroxisome, plasma membrane | 81.66 | 82.23 |
| KRG97766 | Soybean | endoplasmic reticulum, extracellular, mitochondrion, plasma membrane | 35.99 | 77.61 |
| KRG91899 | Soybean | plasma membrane | 67.13 | 68.31 |
| KRH60692 | Soybean | mitochondrion | 64.36 | 67.64 |
| KRH51390 | Soybean | plasma membrane | 64.01 | 66.55 |
| KRH08523 | Soybean | plasma membrane | 65.4 | 66.32 |
| KRH70183 | Soybean | mitochondrion | 65.4 | 66.32 |
| KRH08522 | Soybean | plasma membrane | 65.4 | 66.32 |
| KRG95980 | Soybean | plasma membrane | 65.05 | 65.96 |
| KRH34875 | Soybean | plasma membrane | 67.13 | 65.54 |
| KRH70184 | Soybean | plasma membrane | 64.36 | 65.26 |
| KRH67688 | Soybean | plasma membrane | 64.36 | 65.03 |
| KRH29919 | Soybean | mitochondrion | 64.36 | 65.03 |
| KRH75838 | Soybean | golgi, peroxisome, plasma membrane | 81.66 | 65.01 |
| KRH25011 | Soybean | mitochondrion | 64.01 | 64.69 |
| KRH26410 | Soybean | golgi, peroxisome, plasma membrane | 63.67 | 64.11 |
| KRH16406 | Soybean | extracellular | 33.91 | 64.05 |
| KRH22889 | Soybean | golgi, peroxisome, plasma membrane | 62.98 | 63.41 |
| KRG93712 | Soybean | plasma membrane, vacuole | 29.76 | 36.29 |
| KRH44312 | Soybean | extracellular | 30.45 | 35.48 |
| KRH34280 | Soybean | endoplasmic reticulum | 31.14 | 35.43 |
| KRH23420 | Soybean | plasma membrane, vacuole | 30.1 | 35.22 |
| KRH09912 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 30.1 | 35.22 |
| KRH47241 | Soybean | mitochondrion | 30.1 | 35.08 |
| KRH09321 | Soybean | cytosol, mitochondrion, plasma membrane | 30.45 | 34.51 |
| KRH38823 | Soybean | nucleus | 30.45 | 34.51 |
| KRG92517 | Soybean | cytosol | 30.1 | 34.25 |
| KRH70511 | Soybean | cytosol | 29.76 | 34.13 |
| KRH28112 | Soybean | mitochondrion | 29.07 | 33.73 |
| KRH77347 | Soybean | mitochondrion | 29.07 | 33.73 |
| KRH01591 | Soybean | cytosol | 29.07 | 33.33 |
| KRH23017 | Soybean | cytosol, plasma membrane, vacuole | 28.72 | 32.94 |
| KRH29856 | Soybean | cytosol, plasma membrane, vacuole | 28.37 | 32.54 |
| KRH10300 | Soybean | endoplasmic reticulum, extracellular | 17.99 | 32.5 |
| KRH67767 | Soybean | mitochondrion | 28.03 | 32.4 |
| KRH24847 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 27.34 | 32.24 |
| KRH52727 | Soybean | cytosol | 26.99 | 31.71 |
| KRH62059 | Soybean | cytosol, plasma membrane, vacuole | 26.99 | 31.71 |
| KRG96046 | Soybean | nucleus | 27.34 | 31.6 |
| KRH36204 | Soybean | cytosol, extracellular, mitochondrion, plasma membrane | 26.99 | 30.95 |
| KRH19959 | Soybean | mitochondrion | 25.95 | 30.0 |
| KRG90553 | Soybean | extracellular | 24.91 | 29.63 |
| KRH23943 | Soybean | plasma membrane | 17.65 | 27.87 |
| KRH39857 | Soybean | plastid | 23.18 | 26.59 |
Protein Annotations
| Gene3D:1.20.1080.10 | EntrezGene:100780145 | MapMan:24.3.1.2 | UniProt:A0A0R0GAK0 | EMBL:ACUP02008548 | InterPro:Aquaporin-like |
| InterPro:Aquaporin_transptr | EnsemblPlantsGene:GLYMA_14G061500 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR023271 |
| EnsemblPlants:KRH14983 | ProteinID:KRH14983 | ProteinID:KRH14983.1 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 |
| PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF259 | SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 |
| TMHMM:TMhelix | UniParc:UPI0001B3675F | : | : | : | : |
Description
hypothetical protein
Coordinates
chr14:+:4978299..4980309
Molecular Weight (calculated)
30617.3 Da
IEP (calculated)
8.586
GRAVY (calculated)
0.439
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGKEQDVSL GANKFPERQP IGTAAQSQDD GKDYQEPAPA PLVDPTEFTS WSFYRAGIAE FVATFLFLYI TVLTVMGVAG AKSKCSTVGI QGIAWAFGGM
101: IFALVYCTAG ISGGHINPAV TFGLFLARKL SLPRAIFYIV MQCLGAICGA GVVKGFEGKT KYGALNGGAN FVAPGYTKGD GLGAEIVGTF ILVYTVFSAT
201: DAKRSARDSH VPILAPLPIG FAVFLVHLAT IPITGTGINP ARSLGAAIIF NKDLGWDEHW IFWVGPFIGA ALAALYHQVV IRAIPFKSK
101: IFALVYCTAG ISGGHINPAV TFGLFLARKL SLPRAIFYIV MQCLGAICGA GVVKGFEGKT KYGALNGGAN FVAPGYTKGD GLGAEIVGTF ILVYTVFSAT
201: DAKRSARDSH VPILAPLPIG FAVFLVHLAT IPITGTGINP ARSLGAAIIF NKDLGWDEHW IFWVGPFIGA ALAALYHQVV IRAIPFKSK
001: MEGKEEDVRV GANKFPERQP IGTSAQTDKD YKEPPPAPFF EPGELSSWSF YRAGIAEFIA TFLFLYITVL TVMGVKRAPN MCASVGIQGI AWAFGGMIFA
101: LVYCTAGISG GHINPAVTFG LFLARKLSLT RAVFYIVMQC LGAICGAGVV KGFQPNPYQT LGGGANTVAH GYTKGSGLGA EIIGTFVLVY TVFSATDAKR
201: SARDSHVPIL APLPIGFAVF LVHLATIPIT GTGINPARSL GAAIIYNKDH AWDDHWIFWV GPFIGAALAA LYHQLVIRAI PFKSRS
101: LVYCTAGISG GHINPAVTFG LFLARKLSLT RAVFYIVMQC LGAICGAGVV KGFQPNPYQT LGGGANTVAH GYTKGSGLGA EIIGTFVLVY TVFSATDAKR
201: SARDSHVPIL APLPIGFAVF LVHLATIPIT GTGINPARSL GAAIIYNKDH AWDDHWIFWV GPFIGAALAA LYHQLVIRAI PFKSRS
Arabidopsis Description
PIP1-3TMP-B [Source:UniProtKB/TrEMBL;Acc:A0A178WIA6]
SUBAcon: [peroxisome,golgi,plasma membrane]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.