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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 1
  • vacuole 4
  • extracellular 3
  • golgi 1
  • plasma membrane 1
  • endoplasmic reticulum 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:nucleus, secretory
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:extracellular
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:vacuole
YLoc:extracellular
 mitochondrion: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH44312 Soybean extracellular 99.19 99.19
KRH09912 Soybean endoplasmic reticulum, plasma membrane, vacuole 88.71 89.07
KRG93712 Soybean plasma membrane, vacuole 84.68 88.61
KRH23420 Soybean plasma membrane, vacuole 87.9 88.26
PGSC0003DMT400042613 Potato cytosol, extracellular, plasma membrane 85.08 84.74
Solyc12g044330.1.1 Tomato plastid 83.47 83.47
PGSC0003DMT400068047 Potato cytosol, extracellular, plastid, vacuole 82.26 82.26
GSMUA_Achr6P05830_001 Banana endoplasmic reticulum, extracellular, plasma membrane 79.44 80.41
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid, vacuole 77.82 79.42
GSMUA_Achr9P28940_001 Banana plasma membrane 78.23 79.18
Os06t0336200-01 Rice nucleus 78.23 78.23
VIT_09s0002g04020.t01 Wine grape plasma membrane, vacuole 77.82 77.51
EER89797 Sorghum plasma membrane 77.42 77.42
TraesCS7B01G243000.1 Wheat plasma membrane 76.21 76.21
TraesCS7A01G331300.1 Wheat unclear 76.21 76.21
KRH77347 Soybean mitochondrion 76.21 75.9
HORVU7Hr1G081770.8 Barley plasma membrane 75.81 75.5
Solyc06g066560.1.1 Tomato mitochondrion 83.06 75.46
KRH28112 Soybean mitochondrion 75.0 74.7
TraesCS7D01G339600.1 Wheat plasma membrane 75.0 66.67
KRH67767 Soybean mitochondrion 63.71 63.2
KRH10300 Soybean endoplasmic reticulum, extracellular 39.92 61.88
KRG96046 Soybean nucleus 62.1 61.6
KRH29856 Soybean cytosol, plasma membrane, vacuole 61.69 60.71
KRH24847 Soybean endoplasmic reticulum, plasma membrane, vacuole 59.27 60.0
KRH70511 Soybean cytosol 59.68 58.73
KRH23017 Soybean cytosol, plasma membrane, vacuole 59.68 58.73
KRH01591 Soybean cytosol 58.87 57.94
KRH36204 Soybean cytosol, extracellular, mitochondrion, plasma membrane 55.65 54.76
KRH62059 Soybean cytosol, plasma membrane, vacuole 53.23 53.66
KRH52727 Soybean cytosol 52.82 53.25
KRH19959 Soybean mitochondrion 53.63 53.2
KRH34280 Soybean endoplasmic reticulum 53.63 52.36
KRG92517 Soybean cytosol 52.82 51.57
KRH38823 Soybean nucleus 52.82 51.37
KRH09321 Soybean cytosol, mitochondrion, plasma membrane 52.82 51.37
KRG90553 Soybean extracellular 48.39 49.38
KRH23943 Soybean plasma membrane 34.27 46.45
KRH39857 Soybean plastid 42.34 41.67
KRH60692 Soybean mitochondrion 39.52 35.64
KRH16406 Soybean extracellular 21.77 35.29
KRH22889 Soybean golgi, peroxisome, plasma membrane 40.32 34.84
KRH26410 Soybean golgi, peroxisome, plasma membrane 40.32 34.84
KRH51390 Soybean plasma membrane 38.71 34.53
KRG91899 Soybean plasma membrane 39.52 34.51
KRG97766 Soybean endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 18.55 34.33
KRH29919 Soybean mitochondrion 39.52 34.27
KRH25011 Soybean mitochondrion 39.52 34.27
KRG95980 Soybean plasma membrane 39.11 34.04
KRH70183 Soybean mitochondrion 38.71 33.68
KRH67688 Soybean plasma membrane 38.71 33.57
KRH08523 Soybean plasma membrane 38.31 33.33
KRH70184 Soybean plasma membrane 38.31 33.33
KRH08522 Soybean plasma membrane 38.31 33.33
KRH34875 Soybean plasma membrane 38.71 32.43
KRH66037 Soybean golgi, peroxisome, plasma membrane 35.89 31.34
KRH00178 Soybean golgi, peroxisome, plasma membrane 35.48 30.66
KRH14983 Soybean mitochondrion 35.08 30.1
KRH31119 Soybean endoplasmic reticulum 35.08 30.1
KRH27918 Soybean plasma membrane 34.27 29.72
KRH59918 Soybean peroxisome 34.27 29.62
KRH41192 Soybean endoplasmic reticulum 34.27 29.41
KRH77555 Soybean plasma membrane 33.87 29.37
KRH73156 Soybean golgi, peroxisome, plasma membrane 35.48 27.59
KRH75838 Soybean golgi, peroxisome, plasma membrane 36.69 25.07
Protein Annotations
Gene3D:1.20.1080.10EntrezGene:100306092MapMan:24.3.1.3UniProt:A0A0R0J452EMBL:ACUP02004142InterPro:Aquaporin-like
InterPro:Aquaporin_transptrEnsemblPlantsGene:GLYMA_07G018000GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:IPR023271
EnsemblPlants:KRH47241ProteinID:KRH47241ProteinID:KRH47241.1InterPro:MIPInterPro:MIP_CSPFAM:PF00230
PRINTS:PR00783ScanProsite:PS00221PANTHER:PTHR19139PANTHER:PTHR19139:SF257SUPFAM:SSF81338TIGRFAMs:TIGR00861
TMHMM:TMhelixUniParc:UPI00019D342DSEG:seg:::
Description
hypothetical protein
Coordinates
chr7:+:1437693..1439843
Molecular Weight (calculated)
25228.6 Da
IEP (calculated)
6.125
GRAVY (calculated)
0.857
Length
248 amino acids
Sequence
(BLAST)
001: MGGIAFGRLD DSFSLTSIKA YIAEFHSTLL FVFAGVGSAI AYGKLTSDAA LDPAGLLAVA ICHGFALFVA VSVGANISGG HVNPAVTFGL ALGGHITILT
101: GFFYWIAQLL GSIVACFLLN YVTGGLPTPI HSVASGVGAV EGVVTEIIIT FGLVYTVYAT AADPKKGSLG TIAPIAIGFI VGANILAAGP FSGGSMNPAR
201: SFGPAVVSGD FHDNWIYWVG PLIGGGLAGL IYGNVFIRSD HAPLSSEF
Best Arabidopsis Sequence Match ( AT3G16240.1 )
(BLAST)
001: MAGVAFGSFD DSFSLASLRA YLAEFISTLL FVFAGVGSAI AYAKLTSDAA LDTPGLVAIA VCHGFALFVA VAIGANISGG HVNPAVTFGL AVGGQITVIT
101: GVFYWIAQLL GSTAACFLLK YVTGGLAVPT HSVAAGLGSI EGVVMEIIIT FALVYTVYAT AADPKKGSLG TIAPLAIGLI VGANILAAGP FSGGSMNPAR
201: SFGPAVAAGD FSGHWVYWVG PLIGGGLAGL IYGNVFMGSS EHVPLASADF
Arabidopsis Description
TIP2-1Aquaporin TIP2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q41951]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.