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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 1
  • vacuole 3
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, plastid, secretory
BaCelLo:plastid
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
 nucleus: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG92517
KRH09321
KRH09922
KRH11076
KRH21197
KRH22653
KRH23409
KRH26664
KRH34280
KRH38823
KRH42923
KRH42926
KRH45251
KRH59035
KRH59036

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G73190.1 KRG92517 AT1G73190.1 23163742
AT1G73190.1 KRH09321 AT1G73190.1 23163742
AT1G73190.1 KRH34280 AT1G73190.1 23163742
AT1G73190.1 KRH38823 AT1G73190.1 23163742
AT1G73190.1 KRH09922 AT3G16310.1 21798944
AT1G73190.1 KRH23409 AT3G16310.1 21798944
AT1G73190.1 KRH11076 AT4G19030.1 21798944
AT1G73190.1 KRH21197 AT4G19030.1 21798944
AT1G73190.1 KRH42923 AT4G19030.1 21798944
AT1G73190.1 KRH42926 AT4G19030.1 21798944
AT1G73190.1 KRH45251 AT4G19030.1 21798944
AT1G73190.1 KRH59035 AT4G19030.1 21798944
AT1G73190.1 KRH59036 AT4G19030.1 21798944
AT1G73190.1 KRH22653 AT5G22290.1 21798944
AT1G73190.1 KRH26664 AT5G22290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH09321 Soybean cytosol, mitochondrion, plasma membrane 97.25 97.25
KRH34280 Soybean endoplasmic reticulum 77.65 77.95
KRG92517 Soybean cytosol 76.86 77.17
VIT_16s0039g00220.t01 Wine grape cytosol 72.55 71.43
CDX68239 Canola cytosol 74.12 71.32
CDY11123 Canola cytosol 74.12 71.32
CDY66321 Canola plasma membrane 74.12 71.05
AT1G17810.1 Thale cress cytosol, golgi, plasma membrane 73.73 70.41
AT1G73190.1 Thale cress plasma membrane 73.33 69.78
CDY48045 Canola golgi, mitochondrion, plasma membrane 72.55 69.55
Bra008079.1-P Field mustard golgi, mitochondrion, plasma membrane 72.55 69.55
CDY19176 Canola plasma membrane 72.16 68.91
CDY21731 Canola golgi, mitochondrion, plasma membrane 72.16 68.91
Bra031005.1-P Field mustard golgi, mitochondrion, plasma membrane 72.16 68.91
Solyc06g072130.2.1 Tomato extracellular 69.8 68.73
CDX81850 Canola golgi, mitochondrion, plasma membrane 71.76 68.54
Bra025947.1-P Field mustard cytosol, golgi, plasma membrane 71.76 68.54
PGSC0003DMT400069330 Potato cytosol 69.41 68.34
CDX72962 Canola plasma membrane 70.98 68.3
CDX96453 Canola cytosol 70.98 68.3
Bra016014.1-P Field mustard cytosol 70.98 68.3
CDY26214 Canola plasma membrane 71.37 68.16
GSMUA_Achr2P10640_001 Banana cytosol, golgi, plasma membrane 66.27 66.54
Solyc03g019820.2.1 Tomato cytosol, golgi, plasma membrane 67.45 66.15
PGSC0003DMT400039507 Potato cytosol, golgi, plasma membrane 67.06 65.77
GSMUA_Achr4P26010_001 Banana cytosol, golgi, plasma membrane 65.1 65.35
Zm00001d013956_P003 Maize plasma membrane 62.35 60.69
HORVU1Hr1G043890.2 Barley mitochondrion 62.35 60.46
TraesCS1A01G165400.1 Wheat golgi, mitochondrion, plasma membrane, plastid 62.35 60.46
TraesCS1D01G175200.1 Wheat unclear 62.35 60.46
TraesCS1B01G182200.1 Wheat golgi 61.96 60.08
KRG96046 Soybean nucleus 58.04 59.2
Os10t0492600-01 Rice plastid 61.18 59.09
EER94020 Sorghum golgi, mitochondrion, plasma membrane 61.18 58.65
Zm00001d032610_P003 Maize mitochondrion, plastid 60.78 58.27
KRH67767 Soybean mitochondrion 56.86 58.0
KRH70511 Soybean cytosol 54.12 54.76
KRH24847 Soybean endoplasmic reticulum, plasma membrane, vacuole 52.16 54.29
KRH29856 Soybean cytosol, plasma membrane, vacuole 53.33 53.97
Os04t0527900-01 Rice plastid 56.08 53.96
Zm00001d002952_P001 Maize plasma membrane 56.08 53.96
TraesCS2D01G370800.1 Wheat plasma membrane 56.08 53.96
TraesCS2A01G374400.1 Wheat plasma membrane 56.08 53.96
TraesCS2B01G391400.1 Wheat extracellular, plasma membrane, vacuole 55.69 53.58
KRH23017 Soybean cytosol, plasma membrane, vacuole 52.94 53.57
KRH01591 Soybean cytosol 52.94 53.57
KRH09912 Soybean endoplasmic reticulum, plasma membrane, vacuole 51.76 53.44
KRH19959 Soybean mitochondrion 52.16 53.2
KRG93712 Soybean plasma membrane, vacuole 49.41 53.16
EES11105 Sorghum mitochondrion, plasma membrane 55.69 52.99
KRH44312 Soybean extracellular 51.37 52.82
KRH47241 Soybean mitochondrion 51.37 52.82
KRH23420 Soybean plasma membrane, vacuole 50.98 52.63
KRH36204 Soybean cytosol, extracellular, mitochondrion, plasma membrane 51.37 51.98
KRH10300 Soybean endoplasmic reticulum, extracellular 32.55 51.88
KRH77347 Soybean mitochondrion 49.41 50.6
KRH28112 Soybean mitochondrion 48.63 49.8
KRG90553 Soybean extracellular 46.27 48.56
KRH62059 Soybean cytosol, plasma membrane, vacuole 43.14 44.72
KRH52727 Soybean cytosol 43.14 44.72
EER95659 Sorghum mitochondrion 45.88 43.17
KRH23943 Soybean plasma membrane 27.06 37.7
KRH39857 Soybean plastid 37.25 37.7
KRG97766 Soybean endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 19.22 36.57
Zm00001d048520_P014 Maize mitochondrion 35.29 33.58
KRH16406 Soybean extracellular 18.82 31.37
KRH00178 Soybean golgi, peroxisome, plasma membrane 34.9 31.01
KRH14983 Soybean mitochondrion 34.51 30.45
KRH31119 Soybean endoplasmic reticulum 34.51 30.45
KRH27918 Soybean plasma membrane 34.12 30.42
KRH77555 Soybean plasma membrane 34.12 30.42
KRH59918 Soybean peroxisome 33.73 29.97
KRG91899 Soybean plasma membrane 33.33 29.93
KRH66037 Soybean golgi, peroxisome, plasma membrane 33.33 29.93
KRH41192 Soybean endoplasmic reticulum 33.73 29.76
KRH26410 Soybean golgi, peroxisome, plasma membrane 33.33 29.62
KRH22889 Soybean golgi, peroxisome, plasma membrane 33.33 29.62
KRH51390 Soybean plasma membrane 32.16 29.5
KRG95980 Soybean plasma membrane 32.94 29.47
KRH60692 Soybean mitochondrion 31.76 29.45
KRH70183 Soybean mitochondrion 32.55 29.12
KRH08522 Soybean plasma membrane 32.55 29.12
KRH08523 Soybean plasma membrane 32.55 29.12
KRH25011 Soybean mitochondrion 32.55 29.02
KRH29919 Soybean mitochondrion 32.55 29.02
KRH70184 Soybean plasma membrane 32.16 28.77
KRH67688 Soybean plasma membrane 32.16 28.67
KRH34875 Soybean plasma membrane 32.16 27.7
KRH73156 Soybean golgi, peroxisome, plasma membrane 34.51 27.59
KRH75838 Soybean golgi, peroxisome, plasma membrane 33.33 23.42
Protein Annotations
Gene3D:1.20.1080.10EntrezGene:100817450MapMan:24.3.1.3UniProt:A0A0R0I960EMBL:ACUP02005881InterPro:Aquaporin-like
InterPro:Aquaporin_transptrEnsemblPlantsGene:GLYMA_09G160500GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:IPR023271
EnsemblPlants:KRH38823ProteinID:KRH38823ProteinID:KRH38823.1InterPro:MIPInterPro:MIP_CSPFAM:PF00230
PRINTS:PR00783ScanProsite:PS00221PANTHER:PTHR19139PANTHER:PTHR19139:SF30SUPFAM:SSF81338TIGRFAMs:TIGR00861
TMHMM:TMhelixUniParc:UPI00018C6C59SEG:seg:::
Description
hypothetical protein
Coordinates
chr9:-:38473983..38476042
Molecular Weight (calculated)
27029.1 Da
IEP (calculated)
7.085
GRAVY (calculated)
0.634
Length
255 amino acids
Sequence
(BLAST)
001: MATRRYAFGR ADEATHPDSM RATLAEFVST FIFVFAGEGS GLALVKIYQD SAFSAGELLA VALAHGFALF AAVSASMHVS GGHVNPAVTF GALIGGRISV
101: LRAVYYWIAQ ILGAIVAALV LRLVTNNMRP SGFHVGQGVG VGHMLILEIV MTFGLMYTVY GTAIDPKRGA VSNIAPLAIG LIVGANILVG GPFDGACMNP
201: ALAFGPSLVG WRWHQHWIFW VGPLIGAALA ALVYEYVVIP TEPPHQHQPL APEDY
Best Arabidopsis Sequence Match ( AT1G73190.1 )
(BLAST)
001: MATSARRAYG FGRADEATHP DSIRATLAEF LSTFVFVFAA EGSILSLDKL YWEHAAHAGT NTPGGLILVA LAHAFALFAA VSAAINVSGG HVNPAVTFGA
101: LVGGRVTAIR AIYYWIAQLL GAILACLLLR LTTNGMRPVG FRLASGVGAV NGLVLEIILT FGLVYVVYST LIDPKRGSLG IIAPLAIGLI VGANILVGGP
201: FSGASMNPAR AFGPALVGWR WHDHWIYWVG PFIGSALAAL IYEYMVIPTE PPTHHAHGVH QPLAPEDY
Arabidopsis Description
TIP3-1Aquaporin TIP3-1 [Source:UniProtKB/Swiss-Prot;Acc:P26587]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.