CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

nucleus 1
vacuole 4
endoplasmic reticulum 2
extracellular 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29856	Soybean	cytosol, plasma membrane, vacuole	96.33	93.65
KRH23017	Soybean	cytosol, plasma membrane, vacuole	88.98	86.51
KRH10300	Soybean	endoplasmic reticulum, extracellular	53.06	81.25
GSMUA_Achr10P...	Banana	plasma membrane	79.18	76.98
Solyc06g075650.2.1	Tomato	endoplasmic reticulum	79.18	76.68
PGSC0003DMT400077927	Potato	cytosol, plasma membrane, plastid, vacuole	78.78	76.28
GSMUA_Achr6P15380_001	Banana	cytosol, plasma membrane, vacuole	77.96	75.79
KRH67767	Soybean	mitochondrion	77.14	75.6
KRH70511	Soybean	cytosol	77.14	75.0
KRG96046	Soybean	nucleus	76.33	74.8
TraesCS3D01G540900.1	Wheat	plasma membrane	76.73	74.6
TraesCS3A01G535300.1	Wheat	plasma membrane	76.73	74.6
Zm00001d011778_P001	Maize	plasma membrane	77.14	74.41
VIT_06s0004g04120.t01	Wine grape	cytosol, plasma membrane, vacuole	81.22	74.25
TraesCS3B01G608500.1	Wheat	plasma membrane	76.33	74.21
HORVU3Hr1G116790.2	Barley	vacuole	76.33	74.21
KRH01591	Soybean	cytosol	75.1	73.02
EES04303	Sorghum	cytosol	74.69	70.93
KRH36204	Soybean	cytosol, extracellular, mitochondrion, plasma membrane	71.02	69.05
KRG90553	Soybean	extracellular	62.86	63.37
KRG93712	Soybean	plasma membrane, vacuole	59.59	61.6
KRH19959	Soybean	mitochondrion	62.86	61.6
KRH77347	Soybean	mitochondrion	62.45	61.45
KRH28112	Soybean	mitochondrion	62.04	61.04
KRH09912	Soybean	endoplasmic reticulum, plasma membrane, vacuole	61.22	60.73
KRH23420	Soybean	plasma membrane, vacuole	60.82	60.32
KRH44312	Soybean	extracellular	60.41	59.68
KRH47241	Soybean	mitochondrion	60.0	59.27
KRH38823	Soybean	nucleus	54.29	52.16
KRH34280	Soybean	endoplasmic reticulum	53.47	51.57
KRH09321	Soybean	cytosol, mitochondrion, plasma membrane	53.47	51.37
KRG92517	Soybean	cytosol	52.65	50.79
KRH52727	Soybean	cytosol	49.8	49.59
KRH62059	Soybean	cytosol, plasma membrane, vacuole	49.8	49.59
KRH23943	Soybean	plasma membrane	31.43	42.08
KRH39857	Soybean	plastid	40.41	39.29
KRH16406	Soybean	extracellular	20.0	32.03
KRG97766	Soybean	endoplasmic reticulum, extracellular, mitochondrion, plasma membrane	17.14	31.34
KRH26410	Soybean	golgi, peroxisome, plasma membrane	36.33	31.01
KRH22889	Soybean	golgi, peroxisome, plasma membrane	36.33	31.01
KRG91899	Soybean	plasma membrane	35.92	30.99
KRH70183	Soybean	mitochondrion	35.92	30.88
KRH60692	Soybean	mitochondrion	34.29	30.55
KRH70184	Soybean	plasma membrane	35.51	30.53
KRH08523	Soybean	plasma membrane	35.51	30.53
KRH08522	Soybean	plasma membrane	35.51	30.53
KRH67688	Soybean	plasma membrane	35.1	30.07
KRH51390	Soybean	plasma membrane	33.88	29.86
KRH29919	Soybean	mitochondrion	34.69	29.72
KRH25011	Soybean	mitochondrion	34.69	29.72
KRG95980	Soybean	plasma membrane	34.29	29.47
KRH34875	Soybean	plasma membrane	35.51	29.39
KRH00178	Soybean	golgi, peroxisome, plasma membrane	33.47	28.57
KRH66037	Soybean	golgi, peroxisome, plasma membrane	32.24	27.82
KRH77555	Soybean	plasma membrane	32.24	27.62
KRH31119	Soybean	endoplasmic reticulum	32.24	27.34
KRH14983	Soybean	mitochondrion	32.24	27.34
KRH27918	Soybean	plasma membrane	31.84	27.27
KRH59918	Soybean	peroxisome	31.84	27.18
KRH41192	Soybean	endoplasmic reticulum	31.84	26.99
KRH73156	Soybean	golgi, peroxisome, plasma membrane	32.24	24.76
KRH75838	Soybean	golgi, peroxisome, plasma membrane	32.24	21.76

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.3	EMBL:ACUP02007188	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlantsGene:GLYMA_12G066200
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833	GO:GO:0008150
GO:GO:0009705	GO:GO:0015250	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220
GO:GO:0042807	GO:GO:0055085	UniProt:I1LQT8	InterPro:IPR023271	EnsemblPlants:KRH24847	ProteinID:KRH24847
ProteinID:KRH24847.1	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221
PANTHER:PTHR19139	PANTHER:PTHR19139:SF265	SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI00023D0D13	:

Description

hypothetical protein

Coordinates

chr12:-:4870919..4872091

Molecular Weight (calculated)

25034.6 Da

IEP (calculated)

6.506

GRAVY (calculated)

0.859

Length

245 amino acids

Sequence
(BLAST)

001: MPISRIAIGN PSEFGQADAL KAALAEFISM LIFVFAGEGS GMAYNKLTDN GSATPAGVVA ASLSHAFALF VAVSVGANIS GGHVNPAVTF GAFIGGHISL
101: LRGILFWIAQ LLGSVVACLL LKFATVGLSP GVGAANALVF EIVMTFGLVY TVYATAVDPK KGKLGIIAPI AIGFIVGANI LAGGTFSGAS MNPAVSFGPA
201: VVSGTWANHW VYWAGPLIGS AIAAVVYETF FITPNSYEQL PVTDY

Best Arabidopsis Sequence Match ( AT2G36830.1 )
(BLAST)

001: MPIRNIAIGR PDEATRPDAL KAALAEFIST LIFVVAGSGS GMAFNKLTEN GATTPSGLVA AAVAHAFGLF VAVSVGANIS GGHVNPAVTF GAFIGGNITL
101: LRGILYWIAQ LLGSVVACLI LKFATGGLAV PAFGLSAGVG VLNAFVFEIV MTFGLVYTVY ATAIDPKNGS LGTIAPIAIG FIVGANILAG GAFSGASMNP
201: AVAFGPAVVS WTWTNHWVYW AGPLVGGGIA GLIYEVFFIN TTHEQLPTTD Y

Arabidopsis Description

TIP1-1Aquaporin TIP1-1 [Source:UniProtKB/Swiss-Prot;Acc:P25818]
SUBAcon: [plasma membrane,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.