CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:

nucleus 1
vacuole 4
cytosol 1
extracellular 1
endoplasmic reticulum 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, vacuole
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH24847	Soybean	endoplasmic reticulum, plasma membrane, vacuole	93.65	96.33
KRH23017	Soybean	cytosol, plasma membrane, vacuole	89.68	89.68
KRH10300	Soybean	endoplasmic reticulum, extracellular	54.76	86.25
GSMUA_Achr10P...	Banana	plasma membrane	80.95	80.95
Solyc06g075650.2.1	Tomato	endoplasmic reticulum	80.16	79.84
PGSC0003DMT400077927	Potato	cytosol, plasma membrane, plastid, vacuole	80.16	79.84
GSMUA_Achr6P15380_001	Banana	cytosol, plasma membrane, vacuole	79.37	79.37
KRH70511	Soybean	cytosol	78.97	78.97
KRH01591	Soybean	cytosol	78.17	78.17
VIT_06s0004g04120.t01	Wine grape	cytosol, plasma membrane, vacuole	82.54	77.61
KRH67767	Soybean	mitochondrion	76.19	76.8
Zm00001d011778_P001	Maize	plasma membrane	77.38	76.77
TraesCS3A01G535300.1	Wheat	plasma membrane	76.59	76.59
TraesCS3D01G540900.1	Wheat	plasma membrane	76.59	76.59
HORVU3Hr1G116790.2	Barley	vacuole	76.19	76.19
TraesCS3B01G608500.1	Wheat	plasma membrane	76.19	76.19
KRG96046	Soybean	nucleus	74.6	75.2
KRH36204	Soybean	cytosol, extracellular, mitochondrion, plasma membrane	73.81	73.81
EES04303	Sorghum	cytosol	75.0	73.26
KRG90553	Soybean	extracellular	63.1	65.43
KRG93712	Soybean	plasma membrane, vacuole	59.92	63.71
KRH19959	Soybean	mitochondrion	62.3	62.8
KRH09912	Soybean	endoplasmic reticulum, plasma membrane, vacuole	61.51	62.75
KRH77347	Soybean	mitochondrion	61.9	62.65
KRH23420	Soybean	plasma membrane, vacuole	61.11	62.35
KRH44312	Soybean	extracellular	61.11	62.1
KRH28112	Soybean	mitochondrion	61.11	61.85
KRH47241	Soybean	mitochondrion	60.71	61.69
KRH34280	Soybean	endoplasmic reticulum	53.97	53.54
KRH38823	Soybean	nucleus	53.97	53.33
KRG92517	Soybean	cytosol	53.17	52.76
KRH09321	Soybean	cytosol, mitochondrion, plasma membrane	53.17	52.55
KRH62059	Soybean	cytosol, plasma membrane, vacuole	50.4	51.63
KRH52727	Soybean	cytosol	50.4	51.63
KRH23943	Soybean	plasma membrane	30.16	41.53
KRH39857	Soybean	plastid	39.29	39.29
KRH16406	Soybean	extracellular	20.63	33.99
KRH22889	Soybean	golgi, peroxisome, plasma membrane	37.3	32.75
KRH26410	Soybean	golgi, peroxisome, plasma membrane	36.9	32.4
KRG97766	Soybean	endoplasmic reticulum, extracellular, mitochondrion, plasma membrane	17.06	32.09
KRG91899	Soybean	plasma membrane	36.11	32.04
KRH70183	Soybean	mitochondrion	36.11	31.93
KRH60692	Soybean	mitochondrion	34.52	31.64
KRH08522	Soybean	plasma membrane	35.71	31.58
KRH70184	Soybean	plasma membrane	35.71	31.58
KRH08523	Soybean	plasma membrane	35.71	31.58
KRH67688	Soybean	plasma membrane	35.32	31.12
KRH51390	Soybean	plasma membrane	34.13	30.94
KRH25011	Soybean	mitochondrion	34.92	30.77
KRH29919	Soybean	mitochondrion	34.92	30.77
KRG95980	Soybean	plasma membrane	34.52	30.53
KRH34875	Soybean	plasma membrane	35.71	30.41
KRH00178	Soybean	golgi, peroxisome, plasma membrane	34.13	29.97
KRH66037	Soybean	golgi, peroxisome, plasma membrane	32.94	29.23
KRH31119	Soybean	endoplasmic reticulum	32.54	28.37
KRH14983	Soybean	mitochondrion	32.54	28.37
KRH77555	Soybean	plasma membrane	32.14	28.32
KRH27918	Soybean	plasma membrane	32.14	28.32
KRH59918	Soybean	peroxisome	31.75	27.87
KRH41192	Soybean	endoplasmic reticulum	31.75	27.68
KRH73156	Soybean	golgi, peroxisome, plasma membrane	32.54	25.71
KRH75838	Soybean	golgi, peroxisome, plasma membrane	32.94	22.86

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.3	UniProt:A0A0R4J4H4	EMBL:ACUP02006829	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr
EnsemblPlantsGene:GLYMA_11G143100	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	EnsemblPlants:KRH29856
ProteinID:KRH29856	ProteinID:KRH29856.1	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783
ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF265	SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI00019D342A

Description

hypothetical protein

Coordinates

chr11:-:10924084..10925772

Molecular Weight (calculated)

25793.3 Da

IEP (calculated)

5.471

GRAVY (calculated)

0.825

Length

252 amino acids

Sequence
(BLAST)

001: MPISRIAIGN PSEFGQADAL KAALAEFISM LIFVFAGEGS GMAYNKLTDN GSATPAGVVA ASLSHAFALF VAVSVGANIS GGHVNPAVTF GAFIGGHISL
101: LRGILYWIAQ LLGSVVACLL LKFATGGLET SAFSLSPGVG AANALVFEIV MTFGLVYTVY ATAVDPKKGN LGIIAPIAIG FIVGANILAG GAFDGASMNP
201: AVSFGPAVVS GTWANHWVYW VGPLIGSAIA AIIYETFFIT PNSYEHLPVT DY

Best Arabidopsis Sequence Match ( AT4G01470.1 )
(BLAST)

001: MPINRIAIGT PGEASRPDAI RAAFAEFFSM VIFVFAGQGS GMAYGKLTGD GPATPAGLVA ASLSHAFALF VAVSVGANVS GGHVNPAVTF GAFIGGNITL
101: LRAILYWIAQ LLGAVVACLL LKVSTGGMET AAFSLSYGVT PWNAVVFEIV MTFGLVYTVY ATAVDPKKGD IGIIAPLAIG LIVGANILVG GAFDGASMNP
201: AVSFGPAVVS WIWTNHWVYW VGPFIGAAIA AIVYDTIFIG SNGHEPLPSN DF

Arabidopsis Description

TIP1-3Aquaporin TIP1-3 [Source:UniProtKB/Swiss-Prot;Acc:O82598]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.