Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 5
- plastid 2
- endoplasmic reticulum 3
- extracellular 2
- golgi 2
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH23420 | Soybean | plasma membrane, vacuole | 97.98 | 97.98 |
| KRG93712 | Soybean | plasma membrane, vacuole | 93.12 | 97.05 |
| KRH44312 | Soybean | extracellular | 89.07 | 88.71 |
| KRH47241 | Soybean | mitochondrion | 89.07 | 88.71 |
| GSMUA_Achr6P05830_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 82.19 | 82.86 |
| CDX82410 | Canola | plasma membrane | 82.59 | 81.93 |
| Bra001626.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 82.19 | 81.53 |
| CDY63821 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 82.19 | 81.53 |
| GSMUA_Achr9P28940_001 | Banana | plasma membrane | 80.57 | 81.22 |
| CDY20190 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 81.78 | 81.12 |
| CDX97733 | Canola | endoplasmic reticulum, extracellular | 81.38 | 81.05 |
| Bra027181.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 81.38 | 81.05 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane, plastid, vacuole | 78.95 | 80.25 |
| CDY30146 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 80.57 | 80.24 |
| AT3G16240.1 | Thale cress | plasma membrane | 80.97 | 80.0 |
| Bra021171.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 67.61 | 79.52 |
| Os06t0336200-01 | Rice | nucleus | 78.14 | 77.82 |
| TraesCS7A01G331300.1 | Wheat | unclear | 77.33 | 77.02 |
| TraesCS7B01G243000.1 | Wheat | plasma membrane | 76.92 | 76.61 |
| EER89797 | Sorghum | plasma membrane | 76.92 | 76.61 |
| HORVU7Hr1G081770.8 | Barley | plasma membrane | 76.92 | 76.31 |
| PGSC0003DMT400006558 | Potato | endoplasmic reticulum, plasma membrane | 76.52 | 75.9 |
| VIT_09s0002g04020.t01 | Wine grape | plasma membrane, vacuole | 75.71 | 75.1 |
| CDX75873 | Canola | extracellular, golgi, vacuole | 83.0 | 74.55 |
| KRH77347 | Soybean | mitochondrion | 74.49 | 73.9 |
| KRH28112 | Soybean | mitochondrion | 74.49 | 73.9 |
| CDY47816 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 74.9 | 73.12 |
| TraesCS7D01G339600.1 | Wheat | plasma membrane | 76.11 | 67.38 |
| KRH67767 | Soybean | mitochondrion | 64.78 | 64.0 |
| KRH10300 | Soybean | endoplasmic reticulum, extracellular | 41.3 | 63.75 |
| KRG96046 | Soybean | nucleus | 64.37 | 63.6 |
| KRH29856 | Soybean | cytosol, plasma membrane, vacuole | 62.75 | 61.51 |
| KRH24847 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 60.73 | 61.22 |
| KRH23017 | Soybean | cytosol, plasma membrane, vacuole | 61.13 | 59.92 |
| KRH70511 | Soybean | cytosol | 58.7 | 57.54 |
| KRH01591 | Soybean | cytosol | 57.89 | 56.75 |
| KRH36204 | Soybean | cytosol, extracellular, mitochondrion, plasma membrane | 56.28 | 55.16 |
| KRH19959 | Soybean | mitochondrion | 55.06 | 54.4 |
| KRH34280 | Soybean | endoplasmic reticulum | 55.87 | 54.33 |
| KRH52727 | Soybean | cytosol | 53.85 | 54.06 |
| KRH62059 | Soybean | cytosol, plasma membrane, vacuole | 53.85 | 54.06 |
| KRG92517 | Soybean | cytosol | 55.06 | 53.54 |
| KRH38823 | Soybean | nucleus | 53.44 | 51.76 |
| KRH09321 | Soybean | cytosol, mitochondrion, plasma membrane | 53.44 | 51.76 |
| KRG90553 | Soybean | extracellular | 48.99 | 49.79 |
| KRH23943 | Soybean | plasma membrane | 33.6 | 45.36 |
| KRH39857 | Soybean | plastid | 43.32 | 42.46 |
| KRH60692 | Soybean | mitochondrion | 40.08 | 36.0 |
| KRH16406 | Soybean | extracellular | 21.86 | 35.29 |
| KRG91899 | Soybean | plasma membrane | 40.49 | 35.21 |
| KRH22889 | Soybean | golgi, peroxisome, plasma membrane | 40.89 | 35.19 |
| KRH26410 | Soybean | golgi, peroxisome, plasma membrane | 40.89 | 35.19 |
| KRH25011 | Soybean | mitochondrion | 40.08 | 34.62 |
| KRH29919 | Soybean | mitochondrion | 40.08 | 34.62 |
| KRH51390 | Soybean | plasma membrane | 38.87 | 34.53 |
| KRG97766 | Soybean | endoplasmic reticulum, extracellular, mitochondrion, plasma membrane | 18.62 | 34.33 |
| KRG95980 | Soybean | plasma membrane | 39.27 | 34.04 |
| KRH70183 | Soybean | mitochondrion | 38.87 | 33.68 |
| KRH67688 | Soybean | plasma membrane | 38.87 | 33.57 |
| KRH34875 | Soybean | plasma membrane | 40.08 | 33.45 |
| KRH08523 | Soybean | plasma membrane | 38.46 | 33.33 |
| KRH08522 | Soybean | plasma membrane | 38.46 | 33.33 |
| KRH70184 | Soybean | plasma membrane | 38.46 | 33.33 |
| KRH66037 | Soybean | golgi, peroxisome, plasma membrane | 35.63 | 30.99 |
| KRH27918 | Soybean | plasma membrane | 35.63 | 30.77 |
| KRH00178 | Soybean | golgi, peroxisome, plasma membrane | 35.63 | 30.66 |
| KRH31119 | Soybean | endoplasmic reticulum | 35.63 | 30.45 |
| KRH59918 | Soybean | peroxisome | 35.22 | 30.31 |
| KRH14983 | Soybean | mitochondrion | 35.22 | 30.1 |
| KRH41192 | Soybean | endoplasmic reticulum | 35.22 | 30.1 |
| KRH77555 | Soybean | plasma membrane | 34.82 | 30.07 |
| KRH73156 | Soybean | golgi, peroxisome, plasma membrane | 35.63 | 27.59 |
| KRH75838 | Soybean | golgi, peroxisome, plasma membrane | 36.03 | 24.52 |
Protein Annotations
| Gene3D:1.20.1080.10 | EntrezGene:100817754 | MapMan:24.3.1.3 | EMBL:ACUP02009113 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr |
| EMBL:BT097971 | UniProt:C6TJW9 | EnsemblPlantsGene:GLYMA_15G018100 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005886 | GO:GO:0005887 |
| GO:GO:0006810 | GO:GO:0006833 | GO:GO:0008150 | GO:GO:0009705 | GO:GO:0015250 | GO:GO:0015267 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034220 | GO:GO:0042807 | GO:GO:0055085 | InterPro:IPR023271 |
| EnsemblPlants:KRH09912 | ProteinID:KRH09912 | ProteinID:KRH09912.1 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 |
| PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF257 | SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 |
| TMHMM:TMhelix | UniParc:UPI0001B16935 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr15:-:1392865..1395155
Molecular Weight (calculated)
25066.5 Da
IEP (calculated)
5.868
GRAVY (calculated)
0.918
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGIAFGSFN DSFSLASIKA YIAEFISTLL FVFAGVGSAI AYAKLTSDAA LDPTGLVAVA ICHGFALFVA VSVGANISGG HVNPAVTFGL ALGGHITILT
101: GLFYWIAQLL GSIVASLLLK FVTGYDTPIH SVAAGVGAGE GVVTEIIITF GLVYTVYATA ADPKKGSLGT IAPIAIGFIV GANILAAGPF SGGSMNPARS
201: FGPAVVSGDF HDNWIYWVGP LIGGGLAGLI YTYAFIPTQH APLATDF
101: GLFYWIAQLL GSIVASLLLK FVTGYDTPIH SVAAGVGAGE GVVTEIIITF GLVYTVYATA ADPKKGSLGT IAPIAIGFIV GANILAAGPF SGGSMNPARS
201: FGPAVVSGDF HDNWIYWVGP LIGGGLAGLI YTYAFIPTQH APLATDF
001: MAGVAFGSFD DSFSLASLRA YLAEFISTLL FVFAGVGSAI AYAKLTSDAA LDTPGLVAIA VCHGFALFVA VAIGANISGG HVNPAVTFGL AVGGQITVIT
101: GVFYWIAQLL GSTAACFLLK YVTGGLAVPT HSVAAGLGSI EGVVMEIIIT FALVYTVYAT AADPKKGSLG TIAPLAIGLI VGANILAAGP FSGGSMNPAR
201: SFGPAVAAGD FSGHWVYWVG PLIGGGLAGL IYGNVFMGSS EHVPLASADF
101: GVFYWIAQLL GSTAACFLLK YVTGGLAVPT HSVAAGLGSI EGVVMEIIIT FALVYTVYAT AADPKKGSLG TIAPLAIGLI VGANILAAGP FSGGSMNPAR
201: SFGPAVAAGD FSGHWVYWVG PLIGGGLAGL IYGNVFMGSS EHVPLASADF
Arabidopsis Description
TIP2-1Aquaporin TIP2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q41951]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.