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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:secretory
BaCelLo:secretory
MultiLoc:endoplasmic reticulum
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY20190 Canola endoplasmic reticulum, plasma membrane, vacuole 99.6 99.6
Bra021171.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 83.13 98.57
CDY30146 Canola endoplasmic reticulum, extracellular, plasma membrane 97.19 97.58
CDX82410 Canola plasma membrane 96.79 96.79
CDX97733 Canola endoplasmic reticulum, extracellular 95.98 96.37
CDX75873 Canola extracellular, golgi, vacuole 96.39 87.27
Solyc12g044330.1.1 Tomato plastid 82.33 82.66
KRH09912 Soybean endoplasmic reticulum, plasma membrane, vacuole 81.53 82.19
KRH23420 Soybean plasma membrane, vacuole 80.72 81.38
GSMUA_Achr6P05830_001 Banana endoplasmic reticulum, extracellular, plasma membrane 79.52 80.82
CDY47816 Canola endoplasmic reticulum, plasma membrane, vacuole 81.93 80.63
KRG93712 Soybean plasma membrane, vacuole 76.71 80.59
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid, vacuole 78.31 80.25
GSMUA_Achr9P28940_001 Banana plasma membrane 78.71 80.0
PGSC0003DMT400006558 Potato endoplasmic reticulum, plasma membrane 78.71 78.71
Os06t0336200-01 Rice nucleus 77.51 77.82
VIT_09s0002g04020.t01 Wine grape plasma membrane, vacuole 76.71 76.71
EER89797 Sorghum plasma membrane 75.1 75.4
Solyc06g066560.1.1 Tomato mitochondrion 81.93 74.73
CDY65121 Canola endoplasmic reticulum, plasma membrane, vacuole 74.7 74.4
TraesCS7B01G243000.1 Wheat plasma membrane 73.9 74.19
CDY64499 Canola endoplasmic reticulum, plasma membrane, vacuole 74.3 74.0
HORVU7Hr1G081770.8 Barley plasma membrane 73.9 73.9
TraesCS7A01G331300.1 Wheat unclear 73.09 73.39
CDY51678 Canola plasma membrane, vacuole 73.09 72.8
CDX77768 Canola endoplasmic reticulum, plasma membrane, vacuole 72.69 72.11
CDY59296 Canola endoplasmic reticulum, plasma membrane, vacuole 72.29 71.71
CDY28932 Canola endoplasmic reticulum, extracellular, vacuole 60.24 71.43
TraesCS7D01G339600.1 Wheat plasma membrane 74.3 66.31
CDY66645 Canola plastid 55.82 62.9
CDY67380 Canola plastid 55.82 62.9
CDY28539 Canola plasma membrane 63.45 62.45
CDY48983 Canola plasma membrane 63.45 62.45
CDX83623 Canola golgi, plasma membrane, plastid 62.65 61.66
CDY13639 Canola plasma membrane 62.65 61.66
CDY53270 Canola plasma membrane 60.64 60.16
CDY69446 Canola cytosol 57.83 57.14
CDY07142 Canola cytosol 57.83 57.14
CDY35336 Canola extracellular 30.52 53.15
CDX77009 Canola cytosol, plasma membrane, vacuole 52.61 52.61
CDY66321 Canola plasma membrane 54.62 51.13
CDY11123 Canola cytosol 53.82 50.57
CDX96453 Canola cytosol 53.82 50.57
CDX68239 Canola cytosol 53.82 50.57
CDY48045 Canola golgi, mitochondrion, plasma membrane 53.82 50.38
CDX72962 Canola plasma membrane 53.41 50.19
CDY21731 Canola golgi, mitochondrion, plasma membrane 52.21 48.69
CDX81850 Canola golgi, mitochondrion, plasma membrane 52.21 48.69
CDY19176 Canola plasma membrane 51.0 47.57
CDY26214 Canola plasma membrane 51.0 47.57
CDY47413 Canola mitochondrion, plastid 42.97 41.47
CDX99048 Canola mitochondrion, plastid 42.57 41.09
CDY66912 Canola extracellular 29.32 35.44
CDY70391 Canola extracellular, golgi 22.49 35.22
CDX72515 Canola golgi, plasma membrane 35.74 35.04
CDX89115 Canola plasma membrane 30.92 34.22
CDX76314 Canola cytosol 38.55 34.16
CDY52648 Canola plasma membrane 38.55 34.16
CDX69112 Canola plasma membrane 38.55 34.16
CDY09192 Canola plasma membrane 35.34 33.98
CDY17511 Canola plasma membrane 38.15 33.81
CDX91341 Canola plasma membrane 38.55 33.68
CDY46758 Canola plasma membrane 38.15 33.57
CDX71032 Canola plasma membrane 34.94 33.46
CDY31523 Canola plasma membrane 34.94 33.46
CDX78177 Canola plasma membrane 38.55 33.45
CDY56697 Canola plasma membrane 38.55 33.45
CDY46759 Canola plasma membrane 38.15 33.33
CDX91340 Canola plasma membrane 38.15 33.33
CDX67611 Canola plasma membrane 38.15 33.22
CDY07519 Canola plasma membrane 38.15 33.22
CDX88767 Canola plasma membrane 34.54 33.08
CDY07681 Canola plasma membrane 38.15 32.99
CDY14415 Canola cytosol, peroxisome, plasma membrane 38.15 32.99
CDY13298 Canola plasma membrane 37.75 32.75
CDX78265 Canola plasma membrane 37.35 32.52
CDX73446 Canola peroxisome 37.35 32.52
CDY53629 Canola cytosol 33.73 32.43
CDY07221 Canola cytosol, peroxisome, plasma membrane 36.95 32.17
CDY51161 Canola cytosol, peroxisome, plasma membrane 36.95 32.17
CDX74983 Canola cytosol, peroxisome, plasma membrane 25.3 31.98
CDX91911 Canola cytosol, peroxisome, plasma membrane 36.95 31.94
CDX74334 Canola cytosol, peroxisome, plasma membrane 36.95 31.94
CDX74777 Canola cytosol, peroxisome, plasma membrane 36.55 31.82
CDY18886 Canola cytosol, peroxisome, plasma membrane 36.55 31.82
CDX83385 Canola cytosol, peroxisome, plasma membrane 36.55 31.82
CDY37078 Canola cytosol, peroxisome, plasma membrane 36.55 31.82
CDY27346 Canola cytosol, peroxisome, plasma membrane 36.55 31.82
CDX95670 Canola cytosol, peroxisome, plasma membrane 36.14 31.47
CDY48920 Canola plasma membrane 36.14 31.47
CDX71738 Canola plasma membrane 36.14 31.47
CDX94185 Canola plasma membrane 36.14 31.36
CDY10936 Canola plasma membrane 36.14 31.36
CDX90046 Canola cytosol, peroxisome, plasma membrane 35.74 31.12
CDY38017 Canola plasma membrane 35.74 31.12
CDX74984 Canola cytosol, peroxisome, plasma membrane 38.15 30.65
CDY15165 Canola plastid 36.14 27.78
CDY66913 Canola cytosol, mitochondrion, nucleus 2.01 10.87
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.3GO:A0A078JC48UniProt:A0A078JC48InterPro:Aquaporin-likeInterPro:Aquaporin_transptr
EnsemblPlants:CDY63821ProteinID:CDY63821ProteinID:CDY63821.1GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0016021GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00039658001InterPro:IPR023271InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783
ScanProsite:PS00221PANTHER:PTHR19139PANTHER:PTHR19139:SF257SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelix
UniParc:UPI00019D3426SEG:seg::::
Description
BnaC01g44580DBnaC01g44580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JC48]
Coordinates
chrLK034355:+:28807..30423
Molecular Weight (calculated)
24979.5 Da
IEP (calculated)
5.439
GRAVY (calculated)
0.990
Length
249 amino acids
Sequence
(BLAST)
001: MAGVAFGSFD DSFSLASLRA YLAEFISTLL FVFAGVGSAI AYAKLTSDAA LDTPGLVAIA VCHGFALFVA VAIGANISGG HVNPAVTFGL ALGGQITLIT
101: GVFYWIAQLL GSTAACFLLK FVTGGLAVPT HSVAAGVGAI EGVVMEIIIT FALVYTVYAT AADPKKGSLG TIAPLAIGLI VGANILAAGP FSGGSMNPAR
201: SFGPAVAAGD FSGHWVYWVG PLIGGGLAGL VYGNVFMPSS EHVPLASEF
Best Arabidopsis Sequence Match ( AT3G16240.1 )
(BLAST)
001: MAGVAFGSFD DSFSLASLRA YLAEFISTLL FVFAGVGSAI AYAKLTSDAA LDTPGLVAIA VCHGFALFVA VAIGANISGG HVNPAVTFGL AVGGQITVIT
101: GVFYWIAQLL GSTAACFLLK YVTGGLAVPT HSVAAGLGSI EGVVMEIIIT FALVYTVYAT AADPKKGSLG TIAPLAIGLI VGANILAAGP FSGGSMNPAR
201: SFGPAVAAGD FSGHWVYWVG PLIGGGLAGL IYGNVFMGSS EHVPLASADF
Arabidopsis Description
TIP2-1Aquaporin TIP2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q41951]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.