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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • golgi 3
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 3
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:golgi
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX67837
CDX71738
CDX71796
CDX84933
CDX89063
CDX89115
CDX94185
CDY03907
CDY07681
CDY10936
CDY14415
CDY15722
CDY27605
CDY41153
CDY48365
CDY48920
CDY66912
CDY66913

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G35100.1 CDX84933 AT1G27300.1 21798944
AT4G35100.1 CDY03907 AT1G27300.1 21798944
AT4G35100.1 CDY15722 AT1G27300.1 21798944
AT4G35100.1 CDY27605 AT1G27300.1 21798944
AT4G35100.1 CDY07681 AT2G39010.1 21798944
AT4G35100.1 CDY14415 AT2G39010.1 21798944
AT4G35100.1 CDX67837 AT3G60600.1 21798944
AT4G35100.1 CDX71796 AT3G60600.1 21798944
AT4G35100.1 CDX89063 AT3G60600.1 21798944
AT4G35100.1 CDY41153 AT3G60600.1 21798944
AT4G35100.1 CDY48365 AT3G60600.1 21798944
AT4G35100.1 CDX71738 AT3G61430.1 21798944
AT4G35100.1 CDX89115 AT3G61430.1 21798944
AT4G35100.1 CDY48920 AT3G61430.1 21798944
AT4G35100.1 CDY66912 AT3G61430.1 21798944
AT4G35100.1 CDY66913 AT3G61430.1 21798944
AT4G35100.1 CDX94185 AT4G23400.1 21798944
AT4G35100.1 CDY10936 AT4G23400.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr5P11480_001 Banana plasma membrane 68.9 88.38
Bra017697.1-P Field mustard cytosol 93.7 84.7
CDX69112 Canola plasma membrane 93.7 84.7
CDY52648 Canola plasma membrane 93.31 84.34
CDY17511 Canola plasma membrane 92.52 83.63
CDX76314 Canola cytosol 92.52 83.63
AT4G35100.1 Thale cress plasma membrane 91.34 82.86
KRH16406 Soybean extracellular 48.43 80.39
KRH60692 Soybean mitochondrion 86.61 80.0
CDY70391 Canola extracellular, golgi 50.0 79.87
VIT_03s0038g02520.t01 Wine grape plasma membrane 85.04 77.42
Solyc01g111660.2.1 Tomato nucleus 85.83 77.03
PGSC0003DMT400015824 Potato plasma membrane 85.83 77.03
KRH51390 Soybean plasma membrane 83.86 76.62
GSMUA_Achr1P07460_001 Banana extracellular 51.57 74.86
GSMUA_Achr2P11190_001 Banana plasma membrane 82.28 74.38
CDY66912 Canola extracellular 59.84 73.79
GSMUA_Achr1P02360_001 Banana unclear 81.89 73.76
Os04t0233400-01 Rice plasma membrane 79.53 71.63
TraesCS2D01G063900.1 Wheat plasma membrane 79.13 70.77
TraesCS2B01G077700.1 Wheat plasma membrane 78.74 70.42
TraesCS2A01G065700.1 Wheat golgi 78.74 70.42
CDX89115 Canola plasma membrane 62.2 70.22
CDY09192 Canola plasma membrane 71.26 69.88
CDX88767 Canola plasma membrane 71.26 69.62
CDX71032 Canola plasma membrane 71.26 69.62
CDY31523 Canola plasma membrane 71.26 69.62
CDY46758 Canola plasma membrane 77.17 69.26
CDX91340 Canola plasma membrane 77.17 68.77
CDY53629 Canola cytosol 70.08 68.73
CDX78177 Canola plasma membrane 77.56 68.64
CDY56697 Canola plasma membrane 77.56 68.64
CDY46759 Canola plasma membrane 76.38 68.07
CDX91341 Canola plasma membrane 75.98 67.72
CDY13298 Canola plasma membrane 75.59 66.9
CDY07681 Canola plasma membrane 75.59 66.67
CDX67611 Canola plasma membrane 74.8 66.43
CDY07519 Canola plasma membrane 74.8 66.43
CDY14415 Canola cytosol, peroxisome, plasma membrane 75.2 66.32
CDX78265 Canola plasma membrane 73.62 65.38
CDX73446 Canola peroxisome 73.62 65.38
GSMUA_Achr1P26380_001 Banana plasma membrane 71.65 64.77
CDX74984 Canola cytosol, peroxisome, plasma membrane 77.17 63.23
CDX74983 Canola cytosol, peroxisome, plasma membrane 48.82 62.94
CDY51161 Canola cytosol, peroxisome, plasma membrane 69.69 61.89
CDY07221 Canola cytosol, peroxisome, plasma membrane 69.29 61.54
CDX74334 Canola cytosol, peroxisome, plasma membrane 69.69 61.46
CDY38017 Canola plasma membrane 68.9 61.19
CDX91911 Canola cytosol, peroxisome, plasma membrane 69.29 61.11
CDX90046 Canola cytosol, peroxisome, plasma membrane 68.5 60.84
CDY10936 Canola plasma membrane 67.72 59.93
CDX94185 Canola plasma membrane 67.32 59.58
CDY37078 Canola cytosol, peroxisome, plasma membrane 66.54 59.09
CDY18886 Canola cytosol, peroxisome, plasma membrane 66.54 59.09
CDX83385 Canola cytosol, peroxisome, plasma membrane 66.54 59.09
CDY27346 Canola cytosol, peroxisome, plasma membrane 66.54 59.09
CDX74777 Canola cytosol, peroxisome, plasma membrane 66.54 59.09
CDX71738 Canola plasma membrane 66.14 58.74
CDY48920 Canola plasma membrane 66.14 58.74
CDX95670 Canola cytosol, peroxisome, plasma membrane 66.14 58.74
HORVU2Hr1G010990.2 Barley plasma membrane 68.11 54.4
CDY15165 Canola plastid 68.5 53.7
CDY28932 Canola endoplasmic reticulum, extracellular, vacuole 30.32 36.67
CDY67380 Canola plastid 31.5 36.2
CDY66645 Canola plastid 31.5 36.2
CDY63821 Canola endoplasmic reticulum, plasma membrane, vacuole 35.04 35.74
CDX82410 Canola plasma membrane 35.04 35.74
CDY20190 Canola endoplasmic reticulum, plasma membrane, vacuole 35.04 35.74
CDX97733 Canola endoplasmic reticulum, extracellular 34.65 35.48
CDY30146 Canola endoplasmic reticulum, extracellular, plasma membrane 34.65 35.48
CDY64499 Canola endoplasmic reticulum, plasma membrane, vacuole 34.65 35.2
CDY65121 Canola endoplasmic reticulum, plasma membrane, vacuole 34.65 35.2
CDY51678 Canola plasma membrane, vacuole 34.25 34.8
CDY47816 Canola endoplasmic reticulum, plasma membrane, vacuole 34.65 34.78
CDY28539 Canola plasma membrane 34.25 34.39
CDY48983 Canola plasma membrane 34.25 34.39
CDY59296 Canola endoplasmic reticulum, plasma membrane, vacuole 33.86 34.26
CDX77768 Canola endoplasmic reticulum, plasma membrane, vacuole 33.86 34.26
CDY07142 Canola cytosol 33.07 33.33
CDY69446 Canola cytosol 33.07 33.33
CDX83623 Canola golgi, plasma membrane, plastid 33.07 33.2
CDY13639 Canola plasma membrane 33.07 33.2
CDY53270 Canola plasma membrane 32.28 32.67
CDX77009 Canola cytosol, plasma membrane, vacuole 31.5 32.13
CDX75873 Canola extracellular, golgi, vacuole 34.65 32.0
CDY66321 Canola plasma membrane 33.46 31.95
CDY35336 Canola extracellular 17.72 31.47
CDY11123 Canola cytosol 32.68 31.32
CDX68239 Canola cytosol 32.68 31.32
CDY48045 Canola golgi, mitochondrion, plasma membrane 32.68 31.2
CDX96453 Canola cytosol 31.89 30.57
CDX72962 Canola plasma membrane 31.5 30.19
CDY19176 Canola plasma membrane 31.5 29.96
CDY26214 Canola plasma membrane 31.5 29.96
CDY21731 Canola golgi, mitochondrion, plasma membrane 31.5 29.96
CDX81850 Canola golgi, mitochondrion, plasma membrane 31.1 29.59
CDX99048 Canola mitochondrion, plastid 27.17 26.74
CDY47413 Canola mitochondrion, plastid 27.17 26.74
CDY66913 Canola cytosol, mitochondrion, nucleus 0.79 4.35
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.2GO:A0A078C6U0InterPro:Aquaporin-likeInterPro:Aquaporin_transptrEnsemblPlants:CDX72515
ProteinID:CDX72515ProteinID:CDX72515.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00100049001InterPro:IPR023271
InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221PANTHER:PTHR19139
PANTHER:PTHR19139:SF196SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelixUniParc:UPI0004EEB74A:
Description
BnaC07g45370D
Coordinates
chrLK031796:+:1666901..1668746
Molecular Weight (calculated)
26993.1 Da
IEP (calculated)
9.753
GRAVY (calculated)
0.558
Length
254 amino acids
Sequence
(BLAST)
001: MYKITGHDKR KTHNFCYFVA TLLFLYVTVA TVIGHKKQTG PCDGVGLLGI AWAFGGMIFV LVYCTAGISG GHINPAVTFG LFLARKVSLV RAVGYMIAQC
101: LGAICGVGFV KAFMKTPYNT LGGGANMVAD GYSNGTALGA EIIGTFVLVY TVFSATDPKR SARDSHIPVL APLPIGFAVF MVHLATIPIT GTGINPARSF
201: GAAVIYNNEK AWDDHWIFWV GPFVGALAAA AYHQYILRAA AVKALASFRS NATN
Best Arabidopsis Sequence Match ( AT4G35100.2 )
(BLAST)
001: MSKEVSEEGK THHGKDYVDP PPAPLLDMGE LKSWSFYRAL IAEFIATLLF LYVTVATVIG HKKQTGPCDG VGLLGIAWAF GGMIFVLVYC TAGISGGHIN
101: PAVTFGLFLA RKVSLVRALG YMIAQCLGAI CGVGFVKAFM KTPYNTLGGG ANTVADGYSK GTALGAEIIG TFVLVYTVFS ATDPKRSARD SHIPVLAPLP
201: IGFAVFMVHL ATIPITGTGI NPARSFGAAV IYNNEKAWDD QWIFWVGPFL GALAAAAYHQ YILRASAIKA LGSFRSNATN
Arabidopsis Description
PIP2-7Aquaporin PIP2-7 [Source:UniProtKB/Swiss-Prot;Acc:P93004]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.