Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032817.1-P | Field mustard | nucleus | 97.01 | 97.01 |
| CDX84933 | Canola | cytosol | 93.53 | 95.43 |
| CDY15722 | Canola | cytosol | 79.1 | 80.3 |
| CDY03907 | Canola | cytosol | 76.12 | 78.87 |
| AT1G27300.1 | Thale cress | nucleus | 70.15 | 70.5 |
| VIT_01s0010g03800.t01 | Wine grape | cytosol | 33.33 | 34.18 |
| KRH31520 | Soybean | cytosol | 22.89 | 30.26 |
| KRG97393 | Soybean | nucleus | 25.87 | 27.66 |
| Solyc05g015640.2.1 | Tomato | cytosol | 26.87 | 26.73 |
| PGSC0003DMT400084737 | Potato | cytosol | 27.36 | 26.57 |
| KRH76090 | Soybean | nucleus | 14.93 | 26.09 |
| HORVU2Hr1G084420.1 | Barley | cytosol | 24.38 | 25.52 |
| TraesCS2D01G345400.1 | Wheat | cytosol | 24.88 | 25.51 |
| TraesCS2A01G346700.1 | Wheat | cytosol | 24.38 | 25.26 |
| TraesCS2B01G365000.1 | Wheat | cytosol | 23.38 | 24.48 |
| Zm00001d016570_P001 | Maize | cytosol | 24.38 | 22.79 |
| Zm00001d050563_P001 | Maize | nucleus | 22.89 | 22.77 |
| Os02t0509600-01 | Rice | plasma membrane | 23.38 | 22.27 |
| EES05123 | Sorghum | nucleus | 23.38 | 21.86 |
Protein Annotations
| EnsemblPlants:CDY27605 | EnsemblPlantsGene:GSBRNA2T00038350001 | ncoils:Coil | PANTHER:PTHR35280 | ProteinID:CDY27605 | ProteinID:CDY27605.1 |
| SEG:seg | UniParc:UPI0004EF4B1C | UniProt:A0A078GM24 | MapMan:35.2 | : | : |
Description
BnaA09g28020DBnaA09g28020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GM24]
Coordinates
chrLK032207:+:275709..277037
Molecular Weight (calculated)
22762.0 Da
IEP (calculated)
4.755
GRAVY (calculated)
-0.692
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSEDVEVL SRAIEKLLDE KRKREAAGDS FIEDEDDQLL LTRLISQLES PNSIQKTVVT AKDEEGESSP VSSPSKGKQE DKRRLEESIE EIAKDIKEVK
101: RQNKVTHILL SALIILTLTW QLSEYSMIYM MKERLTHPIR SIGGMLSGVF KGKLLPIKNR LQGTSNDKEE NNLHNGNGTN NGVHIQVPDL LREFGFDDDD
201: Q
101: RQNKVTHILL SALIILTLTW QLSEYSMIYM MKERLTHPIR SIGGMLSGVF KGKLLPIKNR LQGTSNDKEE NNLHNGNGTN NGVHIQVPDL LREFGFDDDD
201: Q
001: MESSEDVENL SRAIEKLLHE KRKREASGDA FIEDADDQLF LSSLISQLES PNPKGKEDVI TGEEEEKEEE SADSSPSKGK SEGQRQLEES IEEIAKDIKK
101: VKKQNKITHV LLSATIILTL VWQLSEYSMI FMLKDRISHP VRSIGGMLNG MFKGKLRPIK NQLAGTSNSN DQNNHGNGSH TGPQLQVPEL LREFGFDDEE
101: VKKQNKITHV LLSATIILTL VWQLSEYSMI FMLKDRISHP VRSIGGMLNG MFKGKLRPIK NQLAGTSNSN DQNNHGNGSH TGPQLQVPEL LREFGFDDEE
Arabidopsis Description
F17L21.9 [Source:UniProtKB/TrEMBL;Acc:Q9FZK5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.