Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93148 | Canola | golgi, mitochondrion | 94.78 | 37.8 |
| CDX71195 | Canola | golgi | 91.04 | 36.53 |
| CDX81464 | Canola | golgi, mitochondrion | 88.81 | 34.8 |
| AT2G14835.2 | Thale cress | mitochondrion, plasma membrane | 83.58 | 32.65 |
| CDY37225 | Canola | endoplasmic reticulum, plasma membrane | 91.79 | 30.15 |
| KRG91105 | Soybean | endoplasmic reticulum, nucleus | 69.4 | 27.51 |
| KRH35670 | Soybean | endoplasmic reticulum, nucleus | 68.66 | 27.3 |
| VIT_03s0091g00720.t01 | Wine grape | nucleus, vacuole | 68.66 | 25.63 |
| GSMUA_Achr4P10910_001 | Banana | golgi, mitochondrion | 65.67 | 25.43 |
| GSMUA_Achr3P30110_001 | Banana | golgi | 66.42 | 24.52 |
| PGSC0003DMT400066510 | Potato | cytosol, golgi | 61.94 | 23.99 |
| Solyc01g107150.2.1 | Tomato | nucleus | 61.94 | 23.99 |
| OQU75652 | Sorghum | golgi, mitochondrion, vacuole | 62.69 | 23.46 |
| Os10t0346200-01 | Rice | golgi | 62.69 | 23.33 |
| Zm00001d030421_P001 | Maize | mitochondrion | 62.69 | 23.33 |
| HORVU1Hr1G030480.3 | Barley | cytosol, vacuole | 62.69 | 23.14 |
| TraesCS1A01G129200.1 | Wheat | golgi, vacuole | 61.19 | 22.59 |
| TraesCS1B01G146000.1 | Wheat | golgi, vacuole | 61.19 | 22.59 |
| TraesCS1D01G125500.1 | Wheat | golgi, vacuole | 60.45 | 22.31 |
| HORVU1Hr1G030460.1 | Barley | cytosol | 3.73 | 4.85 |
| CDX89636 | Canola | cytosol | 0.0 | 0.0 |
| Os10t0172600-01 | Rice | cytosol, extracellular, mitochondrion, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX89637 | EnsemblPlantsGene:GSBRNA2T00150011001 | GO:A0A078DL82 | PANTHER:PTHR12981 | ProteinID:CDX89637 | ProteinID:CDX89637.1 |
| TMHMM:TMhelix | UniParc:UPI0004EE05EA | MapMan:35.2 | : | : | : |
Description
BnaC03g45510D
Coordinates
chrLK031860:+:387630..388313
Molecular Weight (calculated)
15083.2 Da
IEP (calculated)
10.403
GRAVY (calculated)
-0.596
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTSSPGHVA AARKGIPAVD RQNSETLYYA DDEDGNKKKY SRRGGPLRHK FLRALLPFWS SALPTLPVTA PPRKDPTKAE DGSEGRVRHR SSRMDIRKIL
101: LFLAIIACMG TMGILYYRLA QRVIGQEITD EEQQ
101: LFLAIIACMG TMGILYYRLA QRVIGQEITD EEQQ
001: MVVCKCKKAT RLYCFVHKAP VCGECICFPE HQTCVVRTYS EWVIDGEYDQ PKCCQCQATF DEGAGHQVTR LGCLHAIHTS CLVSLIKSFP PHTAPAGYVC
101: PACSTPIWPP MMVKDAGSRL HALLREVITQ TGLEKNLLGN HPVSRSTESR SPPPAFASDA LINISSSSHT QEGNNLPDGY SVAGNGEYSK SAVSEIVEID
201: VPASAGSYMK SSSPGLAAAA ARKGVPAVDR QNSETLYYAD DEDGNRKKYS RRGPLRHKFL RALLPFWSSA LPTLPVTAPP RKDAAKADDG SEGRVRHQRS
301: SKMDIRKILI FIALIACMAT MGILYYRLAL QAIGQELPDE EQR
101: PACSTPIWPP MMVKDAGSRL HALLREVITQ TGLEKNLLGN HPVSRSTESR SPPPAFASDA LINISSSSHT QEGNNLPDGY SVAGNGEYSK SAVSEIVEID
201: VPASAGSYMK SSSPGLAAAA ARKGVPAVDR QNSETLYYAD DEDGNRKKYS RRGPLRHKFL RALLPFWSSA LPTLPVTAPP RKDAAKADDG SEGRVRHQRS
301: SKMDIRKILI FIALIACMAT MGILYYRLAL QAIGQELPDE EQR
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q944Q6]
SUBAcon: [mitochondrion,plasma membrane]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.