Factsheet for HORVU1Hr1G030480.3

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, vacuole
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G129200.1	Wheat	golgi, vacuole	97.25	97.25
TraesCS1B01G146000.1	Wheat	golgi, vacuole	96.97	96.97
TraesCS1D01G125500.1	Wheat	golgi, vacuole	96.14	96.14
Os10t0346200-01	Rice	golgi	82.37	83.06
HORVU1Hr1G030460.1	Barley	cytosol	23.14	81.55
OQU75652	Sorghum	golgi, mitochondrion, vacuole	75.76	76.82
Zm00001d030421_P001	Maize	mitochondrion	76.03	76.67
KRG91105	Soybean	endoplasmic reticulum, nucleus	59.23	63.61
KRH35670	Soybean	endoplasmic reticulum, nucleus	58.68	63.2
CDX89637	Canola	plastid	23.14	62.69
GSMUA_Achr3P30110_001	Banana	golgi	62.26	62.26
GSMUA_Achr4P10910_001	Banana	golgi, mitochondrion	58.95	61.85
VIT_03s0091g00720.t01	Wine grape	nucleus, vacuole	59.78	60.45
PGSC0003DMT400066510	Potato	cytosol, golgi	55.65	58.38
CDX89636	Canola	cytosol	26.72	58.08
Solyc01g107150.2.1	Tomato	nucleus	55.1	57.8
CDX71195	Canola	golgi	52.89	57.48
CDX93148	Canola	golgi, mitochondrion	52.89	57.14
Bra039822.1-P	Field mustard	mitochondrion, plasma membrane	53.44	56.73
CDX81464	Canola	golgi, mitochondrion	52.89	56.14
AT2G14835.2	Thale cress	mitochondrion, plasma membrane	52.89	55.98
CDY37225	Canola	endoplasmic reticulum, plasma membrane	51.79	46.08
Os10t0172600-01	Rice	cytosol, extracellular, mitochondrion, plastid	8.26	45.45
Bra013118.1-P	Field mustard	golgi	49.31	44.2

Protein Annotations

EnsemblPlants:HORVU1Hr1G030480.3	EnsemblPlantsGene:HORVU1Hr1G030480	Gene3D:3.30.40.10	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR001841	InterPro:IPR013083	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	PANTHER:PTHR12981	PFscan:PS50089
SEG:seg	SUPFAM:SSF57850	TMHMM:TMhelix	UniParc:UPI000B469905	UniProt:A0A287F1N0	MapMan:35.2

Description

No Description!

Coordinates

chrchr1H:-:175033715..175044595

Molecular Weight (calculated)

40160.8 Da

IEP (calculated)

7.955

GRAVY (calculated)

-0.361

Length

363 amino acids

Sequence
(BLAST)

001: MVVCKCRKAT RVYCFVHQVP VCGECICSPE HQLCVVKNYA EWVVNSDYDW PQHCSLCNLV LEAASEETTR LGCLHVMHTK CLISHVQSFP AQTAPAGFVC
101: PSCSIPIWPP SSIKDTGSRL HAKLKEVVAQ TGLEKNVFGN HFVTMPKADA RTPPAFASDP LKRLSYSGES TAANTLNSSK DATLSSAVLS QGDTYSAGMY
201: SSGILSHVEP EIVEIDGPST IATKFPEQEP NFIRSPSPHG PSATTRKGAN YVERQNSEMS YYADDEDANR KKYTKRGTYR HKFLRMLLPF WSSALPTLPV
301: TAPPKKENDA SEGRPRHQRT SRMDPTKILL AMAIMACIAT MGILYYRLSQ RSLSENFADD EAQ

Best Arabidopsis Sequence Match ( AT2G14835.2 )
(BLAST)

001: MVVCKCKKAT RLYCFVHKAP VCGECICFPE HQTCVVRTYS EWVIDGEYDQ PKCCQCQATF DEGAGHQVTR LGCLHAIHTS CLVSLIKSFP PHTAPAGYVC
101: PACSTPIWPP MMVKDAGSRL HALLREVITQ TGLEKNLLGN HPVSRSTESR SPPPAFASDA LINISSSSHT QEGNNLPDGY SVAGNGEYSK SAVSEIVEID
201: VPASAGSYMK SSSPGLAAAA ARKGVPAVDR QNSETLYYAD DEDGNRKKYS RRGPLRHKFL RALLPFWSSA LPTLPVTAPP RKDAAKADDG SEGRVRHQRS
301: SKMDIRKILI FIALIACMAT MGILYYRLAL QAIGQELPDE EQR

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q944Q6]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.