Factsheet for Bra039822.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
golgi 3
nucleus 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plasma membrane
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G14835.2	Thale cress	mitochondrion, plasma membrane	90.35	90.09
CDY37225	Canola	endoplasmic reticulum, plasma membrane	97.95	82.11
KRG91105	Soybean	endoplasmic reticulum, nucleus	72.51	73.37
KRH35670	Soybean	endoplasmic reticulum, nucleus	71.34	72.4
Bra013118.1-P	Field mustard	golgi	83.63	70.62
VIT_03s0091g00720.t01	Wine grape	nucleus, vacuole	71.93	68.52
Solyc01g107150.2.1	Tomato	nucleus	64.62	63.87
PGSC0003DMT400066510	Potato	cytosol, golgi	64.62	63.87
GSMUA_Achr4P10910_001	Banana	golgi, mitochondrion	60.82	60.12
GSMUA_Achr3P30110_001	Banana	golgi	62.28	58.68
OQU75652	Sorghum	golgi, mitochondrion, vacuole	58.19	55.59
Os10t0346200-01	Rice	golgi	58.19	55.28
Zm00001d030421_P001	Maize	mitochondrion	58.19	55.28
HORVU1Hr1G030480.3	Barley	cytosol, vacuole	56.73	53.44
TraesCS1A01G129200.1	Wheat	golgi, vacuole	56.73	53.44
TraesCS1B01G146000.1	Wheat	golgi, vacuole	56.73	53.44
TraesCS1D01G125500.1	Wheat	golgi, vacuole	55.56	52.34
HORVU1Hr1G030460.1	Barley	cytosol	14.91	49.51
Os10t0172600-01	Rice	cytosol, extracellular, mitochondrion, plastid	7.6	39.39

Protein Annotations

EnsemblPlants:Bra039822.1	EnsemblPlants:Bra039822.1-P	EnsemblPlantsGene:Bra039822	Gene3D:3.30.40.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR001841	InterPro:IPR013083	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	PANTHER:PTHR12981
PFscan:PS50089	SEG:seg	SUPFAM:SSF57850	TMHMM:TMhelix	UniParc:UPI000253EAB3	UniProt:M4FFE9
MapMan:35.2	:	:	:	:	:

Description

AT2G14835 (E=5e-184) | zinc finger (C3HC4-type RING finger) family protein

Coordinates

chrScaffold000178:+:63930..66784

Molecular Weight (calculated)

37459.8 Da

IEP (calculated)

8.377

GRAVY (calculated)

-0.297

Length

342 amino acids

Sequence
(BLAST)

001: MVVCKCRKAT KLYCFVHKVP VCGECICFPE HQTCVVRTYS EWVIDGEYDQ PKCCQCQSTF DEGGGLQVTR LGCLHAIHTS CLVSLIKSFP PHTAPAGYVC
101: PSCSTPIWPP KMVKDAGSRL HAQLREAILQ TGLEKNLFGN HPVSRSTESR SPPPAFASDA LINASSSSLT QEGKSLPDGY SVAGNGEYSK SAVSEIVEID
201: VPASAGNYMK TSSPGFAAAA ARKGVPAVDR QNSETLYYAD DEDGNKKKYS RRGPLRHKFL RALLPFWSNA LPTLPVTAPP RKDATKAEDG SEGRVRHRSS
301: RMDIRKILLF IAIIACMATM GILYYRLAQR VIGQEVPDEE QQ

Best Arabidopsis Sequence Match ( AT2G14835.2 )
(BLAST)

001: MVVCKCKKAT RLYCFVHKAP VCGECICFPE HQTCVVRTYS EWVIDGEYDQ PKCCQCQATF DEGAGHQVTR LGCLHAIHTS CLVSLIKSFP PHTAPAGYVC
101: PACSTPIWPP MMVKDAGSRL HALLREVITQ TGLEKNLLGN HPVSRSTESR SPPPAFASDA LINISSSSHT QEGNNLPDGY SVAGNGEYSK SAVSEIVEID
201: VPASAGSYMK SSSPGLAAAA ARKGVPAVDR QNSETLYYAD DEDGNRKKYS RRGPLRHKFL RALLPFWSSA LPTLPVTAPP RKDAAKADDG SEGRVRHQRS
301: SKMDIRKILI FIALIACMAT MGILYYRLAL QAIGQELPDE EQR

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q944Q6]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.