Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os10t0172600-01 | Rice | cytosol, extracellular, mitochondrion, plastid | 25.24 | 39.39 |
| CDX89636 | Canola | cytosol | 44.66 | 27.54 |
| HORVU1Hr1G030480.3 | Barley | cytosol, vacuole | 81.55 | 23.14 |
| TraesCS1D01G125500.1 | Wheat | golgi, vacuole | 80.58 | 22.86 |
| TraesCS1B01G146000.1 | Wheat | golgi, vacuole | 80.58 | 22.86 |
| TraesCS1A01G129200.1 | Wheat | golgi, vacuole | 80.58 | 22.86 |
| Os10t0346200-01 | Rice | golgi | 74.76 | 21.39 |
| OQU75652 | Sorghum | golgi, mitochondrion, vacuole | 73.79 | 21.23 |
| Zm00001d030421_P001 | Maize | mitochondrion | 73.79 | 21.11 |
| KRH35670 | Soybean | endoplasmic reticulum, nucleus | 56.31 | 17.21 |
| KRG91105 | Soybean | endoplasmic reticulum, nucleus | 56.31 | 17.16 |
| GSMUA_Achr4P10910_001 | Banana | golgi, mitochondrion | 56.31 | 16.76 |
| GSMUA_Achr3P30110_001 | Banana | golgi | 58.25 | 16.53 |
| VIT_03s0091g00720.t01 | Wine grape | nucleus, vacuole | 55.34 | 15.88 |
| CDX93148 | Canola | golgi, mitochondrion | 49.51 | 15.18 |
| AT2G14835.2 | Thale cress | mitochondrion, plasma membrane | 50.49 | 15.16 |
| CDX81464 | Canola | golgi, mitochondrion | 49.51 | 14.91 |
| Bra039822.1-P | Field mustard | mitochondrion, plasma membrane | 49.51 | 14.91 |
| PGSC0003DMT400066510 | Potato | cytosol, golgi | 49.51 | 14.74 |
| CDX71195 | Canola | golgi | 47.57 | 14.67 |
| Solyc01g107150.2.1 | Tomato | nucleus | 48.54 | 14.45 |
| Bra013118.1-P | Field mustard | golgi | 49.51 | 12.59 |
| CDY37225 | Canola | endoplasmic reticulum, plasma membrane | 45.63 | 11.52 |
| CDX89637 | Canola | plastid | 4.85 | 3.73 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G030460.1 | EnsemblPlantsGene:HORVU1Hr1G030460 | PANTHER:PTHR12981 | UniParc:UPI000B464F0F | UniProt:A0A287F1R0 | MapMan:35.2 |
Description
No Description!
Coordinates
chrchr1H:+:174882625..174893840
Molecular Weight (calculated)
11695.2 Da
IEP (calculated)
7.630
GRAVY (calculated)
-0.117
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: CKCRKATRVY CFVHQVPVCG ECICSPEHQL CVVKTNAEWV VNSDYDWPQH CSLCNLVLEA ASEETTRLGC LHVMHNKCLD ITIVPNVSDN KHAPRRGIRL
101: VPY
101: VPY
001: MVVCKCKKAT RLYCFVHKAP VCGECICFPE HQTCVVRTYS EWVIDGEYDQ PKCCQCQATF DEGAGHQVTR LGCLHAIHTS CLVSLIKSFP PHTAPAGYVC
101: PACSTPIWPP MMVKDAGSRL HALLREVITQ TGLEKNLLGN HPVSRSTESR SPPPAFASDA LINISSSSHT QEGNNLPDGY SVAGNGEYSK SAVSEIVEID
201: VPASAGSYMK SSSPGLAAAA ARKGVPAVDR QNSETLYYAD DEDGNRKKYS RRGPLRHKFL RALLPFWSSA LPTLPVTAPP RKDAAKADDG SEGRVRHQRS
301: SKMDIRKILI FIALIACMAT MGILYYRLAL QAIGQELPDE EQR
101: PACSTPIWPP MMVKDAGSRL HALLREVITQ TGLEKNLLGN HPVSRSTESR SPPPAFASDA LINISSSSHT QEGNNLPDGY SVAGNGEYSK SAVSEIVEID
201: VPASAGSYMK SSSPGLAAAA ARKGVPAVDR QNSETLYYAD DEDGNRKKYS RRGPLRHKFL RALLPFWSSA LPTLPVTAPP RKDAAKADDG SEGRVRHQRS
301: SKMDIRKILI FIALIACMAT MGILYYRLAL QAIGQELPDE EQR
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q944Q6]
SUBAcon: [mitochondrion,plasma membrane]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.