Factsheet for PGSC0003DMT400066510

Subcellular Localization

min:

: max

Winner_takes_all: golgi, cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 4
cytosol 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g107150.2.1	Tomato	nucleus	97.11	97.11
VIT_03s0091g00720.t01	Wine grape	nucleus, vacuole	76.3	73.54
KRG91105	Soybean	endoplasmic reticulum, nucleus	71.39	73.08
KRH35670	Soybean	endoplasmic reticulum, nucleus	70.52	72.4
CDX89636	Canola	cytosol	34.39	71.26
CDX93148	Canola	golgi, mitochondrion	63.29	65.18
Bra039822.1-P	Field mustard	mitochondrion, plasma membrane	63.87	64.62
CDX71195	Canola	golgi	61.85	64.07
CDX81464	Canola	golgi, mitochondrion	63.29	64.04
AT2G14835.2	Thale cress	mitochondrion, plasma membrane	63.01	63.56
GSMUA_Achr4P10910_001	Banana	golgi, mitochondrion	62.43	62.43
CDX89637	Canola	plastid	23.99	61.94
Os10t0346200-01	Rice	golgi	60.69	58.33
GSMUA_Achr3P30110_001	Banana	golgi	60.98	58.13
Zm00001d030421_P001	Maize	mitochondrion	59.54	57.22
OQU75652	Sorghum	golgi, mitochondrion, vacuole	58.96	56.98
TraesCS1B01G146000.1	Wheat	golgi, vacuole	58.96	56.2
TraesCS1A01G129200.1	Wheat	golgi, vacuole	58.67	55.92
HORVU1Hr1G030480.3	Barley	cytosol, vacuole	58.38	55.65
TraesCS1D01G125500.1	Wheat	golgi, vacuole	57.51	54.82
CDY37225	Canola	endoplasmic reticulum, plasma membrane	62.43	52.94
Bra013118.1-P	Field mustard	golgi	58.09	49.63
HORVU1Hr1G030460.1	Barley	cytosol	14.74	49.51
Os10t0172600-01	Rice	cytosol, extracellular, mitochondrion, plastid	6.94	36.36

Protein Annotations

EnsemblPlants:PGSC0003DMT400066510	EnsemblPlantsGene:PGSC0003DMG400025845	EntrezGene:102587262	GO:GO:0005575	GO:GO:0008150	GO:GO:0009719
GO:GO:0009737	GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR12981	PGSC:PGSC0003DMG400025845	RefSeq:XP_006346312.1
TMHMM:TMhelix	UniParc:UPI0002964301	UniProt:M1CFN2	MapMan:35.2	:	:

Description

Zinc finger protein-like 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400025845]

Coordinates

chr1:-:83652747..83662088

Molecular Weight (calculated)

38066.6 Da

IEP (calculated)

8.176

GRAVY (calculated)

-0.419

Length

346 amino acids

Sequence
(BLAST)

001: MVVCKCKKAT KLYCFVHKIA VCGECICFPE HQICVIRAYS EWVIDAEYDW PPKCCYCKSE LEEGTGDGTT RLGCLHTIHT NCLVSHLKSF PPHTAPAGYV
101: CPILECSTSI WPPKSVKDSG SRFHTKLKEA IMQTGLEKKL FGNHPVTLPG TEPRGPPPAF ASDPLKHISA GGKDSEGLAA IATGSSKPAS LDIVEIDGST
201: SAPSSMSNHE TNFMKSTSPS GPGATTRKNT LQVERQNSEV SYFADDEDGK RKKYTKRGSF RHKFMRSLLP FWSSSLPTLP VTAPPRKDAS NADEVTEGRQ
301: RHHKSSRMDP RKLLLIIAIM ACMATMGILY YRIAQSGLDE ELPDNE

Best Arabidopsis Sequence Match ( AT2G14835.2 )
(BLAST)

001: MVVCKCKKAT RLYCFVHKAP VCGECICFPE HQTCVVRTYS EWVIDGEYDQ PKCCQCQATF DEGAGHQVTR LGCLHAIHTS CLVSLIKSFP PHTAPAGYVC
101: PACSTPIWPP MMVKDAGSRL HALLREVITQ TGLEKNLLGN HPVSRSTESR SPPPAFASDA LINISSSSHT QEGNNLPDGY SVAGNGEYSK SAVSEIVEID
201: VPASAGSYMK SSSPGLAAAA ARKGVPAVDR QNSETLYYAD DEDGNRKKYS RRGPLRHKFL RALLPFWSSA LPTLPVTAPP RKDAAKADDG SEGRVRHQRS
301: SKMDIRKILI FIALIACMAT MGILYYRLAL QAIGQELPDE EQR

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q944Q6]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.