Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G57280.1 | CDX89333 | AT4G26455.1 | 21798944 |
| AT3G57280.1 | CDX94330 | AT4G26455.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06118 | Canola | plastid | 80.18 | 81.65 |
| CDX88938 | Canola | extracellular | 45.05 | 81.3 |
| Bra007316.1-P | Field mustard | plastid | 78.38 | 80.18 |
| CDY30992 | Canola | plastid | 61.71 | 78.29 |
| CDX67684 | Canola | plastid | 66.22 | 65.04 |
| CDY33831 | Canola | plastid | 62.16 | 60.53 |
| Solyc04g016440.2.1 | Tomato | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 39.19 | 60.42 |
| AT3G57280.1 | Thale cress | plastid | 60.81 | 59.73 |
| VIT_00s0252g00030.t01 | Wine grape | plastid | 52.25 | 50.66 |
| PGSC0003DMT400021095 | Potato | cytosol, nucleus, plasma membrane | 40.99 | 47.4 |
| PGSC0003DMT400033126 | Potato | plastid | 48.2 | 46.93 |
| Solyc10g079260.1.1 | Tomato | plastid | 46.4 | 44.78 |
| KRH66851 | Soybean | plastid | 46.4 | 44.78 |
| KRG95172 | Soybean | mitochondrion | 46.4 | 44.78 |
| CDY65222 | Canola | endoplasmic reticulum, extracellular, vacuole | 20.72 | 38.66 |
| Zm00001d037138_P001 | Maize | extracellular | 13.96 | 38.27 |
| CDY19635 | Canola | extracellular, plasma membrane, vacuole | 20.27 | 37.82 |
| CDY71352 | Canola | endoplasmic reticulum, extracellular, vacuole | 20.27 | 37.82 |
| Os04t0470300-01 | Rice | plastid | 37.39 | 37.22 |
| TraesCS2D01G331600.1 | Wheat | mitochondrion, plastid | 36.94 | 37.1 |
| Zm00001d025663_P003 | Maize | plastid | 35.59 | 36.07 |
| Os06t0301100-01 | Rice | plastid | 38.29 | 35.87 |
| CDY69173 | Canola | plasma membrane | 19.82 | 35.77 |
| EES12340 | Sorghum | plastid | 35.14 | 35.14 |
| Zm00001d036684_P001 | Maize | plastid | 15.32 | 35.05 |
| CDY25185 | Canola | extracellular, plasma membrane | 19.37 | 34.96 |
| TraesCS2A01G331300.1 | Wheat | plastid | 36.49 | 34.76 |
| GSMUA_Achr3P04170_001 | Banana | plastid | 37.84 | 34.01 |
| TraesCS2B01G350900.1 | Wheat | plastid | 35.59 | 33.91 |
| TraesCS7D01G222200.2 | Wheat | plastid | 35.14 | 32.37 |
| Zm00001d021040_P001 | Maize | golgi, peroxisome, plasma membrane | 24.77 | 32.16 |
| TraesCS7B01G127500.2 | Wheat | plastid | 34.68 | 32.08 |
| HORVU2Hr1G081780.5 | Barley | plastid | 35.59 | 31.85 |
| GSMUA_Achr9P12790_001 | Banana | plastid | 35.59 | 31.85 |
| TraesCS7A01G219900.2 | Wheat | plastid | 34.23 | 31.54 |
| Zm00001d035128_P001 | Maize | extracellular | 18.02 | 31.01 |
| EER98049 | Sorghum | plastid | 32.88 | 28.97 |
| Zm00001d018927_P001 | Maize | mitochondrion | 33.78 | 28.3 |
| Zm00001d031990_P001 | Maize | extracellular | 17.57 | 27.46 |
| HORVU7Hr1G045420.1 | Barley | cytosol, peroxisome | 35.14 | 25.66 |
| GSMUA_Achr4P01650_001 | Banana | mitochondrion | 23.42 | 25.62 |
| Zm00001d049001_P001 | Maize | mitochondrion | 18.02 | 20.1 |
| Zm00001d007235_P001 | Maize | plasma membrane | 18.47 | 18.06 |
| CDX82243 | Canola | plasma membrane | 21.62 | 17.45 |
| Zm00001d045615_P001 | Maize | cytosol, endoplasmic reticulum, plastid | 26.58 | 13.44 |
Protein Annotations
| EnsemblPlants:CDX72054 | EnsemblPlantsGene:GSBRNA2T00155843001 | Gene3D:1.20.58.1140 | GO:A0A078C7E4 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:TMEM14 | PANTHER:PTHR12668 | PANTHER:PTHR12668:SF18 | PFAM:PF03647 | ProteinID:CDX72054 |
| ProteinID:CDX72054.1 | TMHMM:TMhelix | UniParc:UPI0004EE75B8 | MapMan:5.8.3 | : | : |
Description
BnaC08g28200D
Coordinates
chrLK031795:-:2056183..2057823
Molecular Weight (calculated)
23901.8 Da
IEP (calculated)
10.220
GRAVY (calculated)
0.062
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAKISQLAC FSSTNRQFHF QNRSFPSLRL RPESFVVRSV VDGNSSETPA SLSYAAEVSK PFVENTTKPY SGVDESATGK EEHVASTQPK RAAKIHDFCF
101: GIPYGGLVMS GGLLGFAFSR NLTSLSTGVL YGGGLLALST LSMKIWRQGK SSFPYILGQA VLSAVVFWKN FTAYSMTKKL FPAGLFAVVS AAMLCFYSYV
201: VLSGGNPPPK KLKPSATTSP SY
101: GIPYGGLVMS GGLLGFAFSR NLTSLSTGVL YGGGLLALST LSMKIWRQGK SSFPYILGQA VLSAVVFWKN FTAYSMTKKL FPAGLFAVVS AAMLCFYSYV
201: VLSGGNPPPK KLKPSATTSP SY
001: MASQISQLAC FSSTNRQFHF QSRSFPCPMI RPQSFVVKSV DGNSSETPAS LSYTAEVSKP VVEKTSKPYS TVDETATNKE SITEPVEEDV ATQPIRAAKI
101: HDFCFGIPYG GLVVSGGLLG FAFSRNLTSL STGVLYGGGL LALSTLSLKI WREGKSSFPY ILGQAVLSAV VFWKNFTAYS MTKKLFPAGV FAVISACMLC
201: FYSYVVLSGG NPPPKKLKPS ATSPSY
101: HDFCFGIPYG GLVVSGGLLG FAFSRNLTSL STGVLYGGGL LALSTLSLKI WREGKSSFPY ILGQAVLSAV VFWKNFTAYS MTKKLFPAGV FAVISACMLC
201: FYSYVVLSGG NPPPKKLKPS ATSPSY
Arabidopsis Description
FAX1Protein FATTY ACID EXPORT 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93V66]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.