Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- plasma membrane 4
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY25185 | Canola | extracellular, plasma membrane | 98.37 | 98.37 |
| AT1G50740.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 76.42 | 78.99 |
| CDY71352 | Canola | endoplasmic reticulum, extracellular, vacuole | 73.17 | 75.63 |
| CDY65222 | Canola | endoplasmic reticulum, extracellular, vacuole | 72.36 | 74.79 |
| CDY19635 | Canola | extracellular, plasma membrane, vacuole | 71.54 | 73.95 |
| KRH14426 | Soybean | endoplasmic reticulum, extracellular | 63.41 | 65.55 |
| GSMUA_Achr6P21760_001 | Banana | endoplasmic reticulum, extracellular | 63.41 | 65.55 |
| Solyc10g006310.2.1 | Tomato | endoplasmic reticulum, extracellular | 62.6 | 64.71 |
| PGSC0003DMT400057207 | Potato | endoplasmic reticulum, extracellular | 48.78 | 64.52 |
| GSMUA_Achr6P29380_001 | Banana | endoplasmic reticulum, extracellular | 61.79 | 63.87 |
| TraesCS7A01G190000.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 60.98 | 63.03 |
| Solyc07g064470.2.1 | Tomato | endoplasmic reticulum, extracellular | 60.98 | 63.03 |
| TraesCS7D01G191200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 60.98 | 63.03 |
| TraesCS7B01G095100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 60.16 | 62.18 |
| Os03t0568500-01 | Rice | endoplasmic reticulum, extracellular | 60.16 | 62.18 |
| PGSC0003DMT400037293 | Potato | endoplasmic reticulum, extracellular | 60.16 | 62.18 |
| Zm00001d013817_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 57.72 | 59.17 |
| VIT_19s0090g00200.t01 | Wine grape | extracellular, golgi, vacuole | 51.22 | 57.8 |
| KXG36347 | Sorghum | cytosol, plasma membrane, vacuole | 51.22 | 40.13 |
| HORVU2Hr1G046220.7 | Barley | extracellular, golgi | 44.72 | 38.73 |
| Zm00001d033054_P001 | Maize | mitochondrion | 58.54 | 37.11 |
| KXG38150 | Sorghum | extracellular, plasma membrane | 38.21 | 36.43 |
| CDX82243 | Canola | plasma membrane | 71.54 | 32.0 |
| CDX88938 | Canola | extracellular | 30.89 | 30.89 |
| CDY30992 | Canola | plastid | 35.77 | 25.14 |
| CDY06118 | Canola | plastid | 35.77 | 20.18 |
| CDX72054 | Canola | plastid | 35.77 | 19.82 |
| CDX67684 | Canola | plastid | 35.77 | 19.47 |
| CDY33831 | Canola | plastid | 35.77 | 19.3 |
Protein Annotations
| EnsemblPlants:CDY69173 | EnsemblPlantsGene:GSBRNA2T00083857001 | Gene3D:1.20.58.1140 | GO:A0A078JNP4 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:TMEM14 | PANTHER:PTHR12668 | PANTHER:PTHR12668:SF14 | PFAM:PF03647 | ProteinID:CDY69173 |
| ProteinID:CDY69173.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0003C717C2 | UniProt:A0A078JNP4 | MapMan:5.8.3 |
| MapMan:24.2.22 | : | : | : | : | : |
Description
BnaC06g41000DBnaC06g41000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JNP4]
Coordinates
chrLK038792:-:1738..2560
Molecular Weight (calculated)
13092.6 Da
IEP (calculated)
10.434
GRAVY (calculated)
0.555
Length
123 amino acids
Sequence
(BLAST)
(BLAST)
001: MHDFCFTIPY GMLLMVGGSM GYFKKGSIAS LAGGAGTGLL VLLAGFITLK AFEKKKKSPV FAVVLQTVIS AGLTFVMGQR YLKTQKIMPA GLVSGISGLM
101: TCFYLYKILT GGNHIPKTTT KAE
101: TCFYLYKILT GGNHIPKTTT KAE
001: MHDFCFTIPY GILLIVGGFI GYLKKGSIAS LAGGAGTGLL VVLAGFISLK AFEKKKTSLL ATLLETVIAA ALTFVMGQRF LQTQKIMPAA LVAGISALMT
101: CFYVYKIATG GNHIPPKAE
101: CFYVYKIATG GNHIPPKAE
Arabidopsis Description
FAX5Protein FATTY ACID EXPORT 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6T7]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.