Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G20510.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 41.4 | 54.62 |
| CDY19635 | Canola | extracellular, plasma membrane, vacuole | 41.4 | 54.62 |
| Solyc07g064470.2.1 | Tomato | endoplasmic reticulum, extracellular | 41.4 | 54.62 |
| CDY65222 | Canola | endoplasmic reticulum, extracellular, vacuole | 40.13 | 52.94 |
| KRH14426 | Soybean | endoplasmic reticulum, extracellular | 40.13 | 52.94 |
| PGSC0003DMT400057207 | Potato | endoplasmic reticulum, extracellular | 31.21 | 52.69 |
| HORVU2Hr1G046220.7 | Barley | extracellular, golgi | 47.13 | 52.11 |
| AT1G50740.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 39.49 | 52.1 |
| CDY71352 | Canola | endoplasmic reticulum, extracellular, vacuole | 39.49 | 52.1 |
| Solyc10g006310.2.1 | Tomato | endoplasmic reticulum, extracellular | 39.49 | 52.1 |
| PGSC0003DMT400037293 | Potato | endoplasmic reticulum, extracellular | 38.85 | 51.26 |
| Bra018873.1-P | Field mustard | extracellular, plasma membrane | 40.13 | 51.22 |
| CDY25185 | Canola | extracellular, plasma membrane | 40.13 | 51.22 |
| CDY69173 | Canola | plasma membrane | 40.13 | 51.22 |
| VIT_19s0090g00200.t01 | Wine grape | extracellular, golgi, vacuole | 33.76 | 48.62 |
| KXG38150 | Sorghum | extracellular, plasma membrane | 23.57 | 28.68 |
| CDX82243 | Canola | plasma membrane | 42.68 | 24.36 |
| EES12340 | Sorghum | plastid | 22.93 | 16.22 |
| EER98049 | Sorghum | plastid | 22.29 | 13.89 |
Protein Annotations
| EnsemblPlants:KXG36347 | EnsemblPlantsGene:SORBI_3002G320100 | Gene3D:1.20.58.1140 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:TMEM14 | PANTHER:PTHR12668 | PANTHER:PTHR12668:SF14 | PFAM:PF03647 | ProteinID:KXG36347 | ProteinID:KXG36347.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI00081AD3DB | UniProt:A0A1B6QEJ9 | MapMan:5.8.3 | MapMan:24.2.22 |
Description
hypothetical protein
Coordinates
chr2:+:69171318..69174323
Molecular Weight (calculated)
15806.7 Da
IEP (calculated)
9.850
GRAVY (calculated)
0.672
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MGPPASPLRR QPPEESAQPR APGKGECGGL GIGMEDDYVT IPYGLLLLAG GVAGYVKRGS AASLAAGGGF GAALLLAGAL SAWAFARGAG GAAAIFATVL
101: QIVCAVLLTV VMGIRYVKTR KIMPAGIIAA ISALVLIFYV YKISTGGNKV YIPVAAE
101: QIVCAVLLTV VMGIRYVKTR KIMPAGIIAA ISALVLIFYV YKISTGGNKV YIPVAAE
001: MHDFCFTIPY GMLLIGGGFI GYMKKGSITS FAGGAGTGLL LILAGYISLK AFEKKKNSTI AMVLQTVIAA ALTLVMGQRY LLTGKIMPAG LVAGISALMT
101: CFYVYKIATG GNKFPAKAE
101: CFYVYKIATG GNKFPAKAE
Arabidopsis Description
FAX6Protein FATTY ACID EXPORT 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJU6]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.