Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- plasma membrane 3
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d013817_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 49.61 | 53.33 |
| Os03t0568500-01 | Rice | endoplasmic reticulum, extracellular | 48.06 | 52.1 |
| TraesCS7D01G191200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 47.29 | 51.26 |
| TraesCS7B01G095100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 47.29 | 51.26 |
| TraesCS7A01G190000.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 47.29 | 51.26 |
| GSMUA_Achr6P29380_001 | Banana | endoplasmic reticulum, extracellular | 44.96 | 48.74 |
| PGSC0003DMT400057207 | Potato | endoplasmic reticulum, extracellular | 34.11 | 47.31 |
| GSMUA_Achr6P21760_001 | Banana | endoplasmic reticulum, extracellular | 41.86 | 45.38 |
| VIT_19s0090g00200.t01 | Wine grape | extracellular, golgi, vacuole | 34.11 | 40.37 |
| Solyc07g064470.2.1 | Tomato | endoplasmic reticulum, extracellular | 37.21 | 40.34 |
| Bra018873.1-P | Field mustard | extracellular, plasma membrane | 36.43 | 38.21 |
| CDY25185 | Canola | extracellular, plasma membrane | 36.43 | 38.21 |
| CDY69173 | Canola | plasma membrane | 36.43 | 38.21 |
| CDY71352 | Canola | endoplasmic reticulum, extracellular, vacuole | 34.88 | 37.82 |
| KRH14426 | Soybean | endoplasmic reticulum, extracellular | 34.88 | 37.82 |
| AT1G50740.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 34.88 | 37.82 |
| AT3G20510.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 34.11 | 36.97 |
| PGSC0003DMT400037293 | Potato | endoplasmic reticulum, extracellular | 34.11 | 36.97 |
| CDY65222 | Canola | endoplasmic reticulum, extracellular, vacuole | 34.11 | 36.97 |
| CDY19635 | Canola | extracellular, plasma membrane, vacuole | 34.11 | 36.97 |
| Solyc10g006310.2.1 | Tomato | endoplasmic reticulum, extracellular | 32.56 | 35.29 |
| Zm00001d033054_P001 | Maize | mitochondrion | 50.39 | 33.51 |
| KXG36347 | Sorghum | cytosol, plasma membrane, vacuole | 28.68 | 23.57 |
| CDX82243 | Canola | plasma membrane | 34.11 | 16.0 |
| EES12340 | Sorghum | plastid | 25.58 | 14.86 |
| EER98049 | Sorghum | plastid | 20.16 | 10.32 |
Protein Annotations
| EnsemblPlants:KXG38150 | EnsemblPlantsGene:SORBI_3001G187200 | Gene3D:1.20.58.1140 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:TMEM14 | PANTHER:PTHR12668 | PANTHER:PTHR12668:SF14 | PFAM:PF03647 | ProteinID:KXG38150 | ProteinID:KXG38150.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI00081AC29A | UniProt:A0A1B6QJQ6 | MapMan:5.8.3 | MapMan:24.2.22 |
Description
hypothetical protein
Coordinates
chr1:+:16450804..16453436
Molecular Weight (calculated)
14234.3 Da
IEP (calculated)
8.087
GRAVY (calculated)
0.147
Length
129 amino acids
Sequence
(BLAST)
(BLAST)
001: MHDFCFTIPY GFAVLAGGVM GYLRRGSTAS LAGGAGAGAI LLLAGFVSLK AFEKRRNSYV ALALQTHLED YASWCCCWSQ CRDVSVLSVQ NCNRRQPHPS
101: KERVNQALTC KLCLIELEDY ERLCLSSCM
101: KERVNQALTC KLCLIELEDY ERLCLSSCM
001: MHDFCFTIPY GMLLIGGGFI GYMKKGSITS FAGGAGTGLL LILAGYISLK AFEKKKNSTI AMVLQTVIAA ALTLVMGQRY LLTGKIMPAG LVAGISALMT
101: CFYVYKIATG GNKFPAKAE
101: CFYVYKIATG GNKFPAKAE
Arabidopsis Description
FAX6Protein FATTY ACID EXPORT 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJU6]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.