Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 6
- golgi 5
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P29380_001 | Banana | endoplasmic reticulum, extracellular | 88.24 | 88.24 |
| Os03t0568500-01 | Rice | endoplasmic reticulum, extracellular | 84.03 | 84.03 |
| TraesCS7D01G191200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 83.19 | 83.19 |
| TraesCS7A01G190000.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 83.19 | 83.19 |
| TraesCS7B01G095100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 81.51 | 81.51 |
| Zm00001d013817_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 78.99 | 78.33 |
| KRH14426 | Soybean | endoplasmic reticulum, extracellular | 72.27 | 72.27 |
| AT1G50740.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 68.91 | 68.91 |
| Solyc07g064470.2.1 | Tomato | endoplasmic reticulum, extracellular | 67.23 | 67.23 |
| PGSC0003DMT400057207 | Potato | endoplasmic reticulum, extracellular | 52.1 | 66.67 |
| Solyc10g006310.2.1 | Tomato | endoplasmic reticulum, extracellular | 66.39 | 66.39 |
| AT3G20510.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 64.71 | 64.71 |
| PGSC0003DMT400037293 | Potato | endoplasmic reticulum, extracellular | 64.71 | 64.71 |
| CDY69173 | Canola | plasma membrane | 65.55 | 63.41 |
| CDY25185 | Canola | extracellular, plasma membrane | 65.55 | 63.41 |
| VIT_19s0090g00200.t01 | Wine grape | extracellular, golgi, vacuole | 57.98 | 63.3 |
| Bra018873.1-P | Field mustard | extracellular, plasma membrane | 64.71 | 62.6 |
| CDY71352 | Canola | endoplasmic reticulum, extracellular, vacuole | 62.18 | 62.18 |
| CDY65222 | Canola | endoplasmic reticulum, extracellular, vacuole | 62.18 | 62.18 |
| CDY19635 | Canola | extracellular, plasma membrane, vacuole | 62.18 | 62.18 |
| Zm00001d033054_P001 | Maize | mitochondrion | 79.83 | 48.97 |
| KXG38150 | Sorghum | extracellular, plasma membrane | 45.38 | 41.86 |
| CDX82243 | Canola | plasma membrane | 65.55 | 28.36 |
| GSMUA_Achr3P04170_001 | Banana | plastid | 29.41 | 14.17 |
| GSMUA_Achr9P12790_001 | Banana | plastid | 27.73 | 13.31 |
| GSMUA_Achr4P01650_001 | Banana | mitochondrion | 21.85 | 12.81 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P21760_001 | EnsemblPlants:GSMUA_Achr6T21760_001 | EnsemblPlantsGene:GSMUA_Achr6G21760_001 | Gene3D:1.20.58.1140 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:TMEM14 | PANTHER:PTHR12668 | PANTHER:PTHR12668:SF14 | PFAM:PF03647 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI00029648A1 | UniProt:M0T924 | MapMan:5.8.3 | MapMan:24.2.22 | : |
Description
Putative UPF0136 membrane protein At2g26240 [Source:GMGC_GENE;Acc:GSMUA_Achr6G21760_001]
Coordinates
chr6:+:18353727..18362447
Molecular Weight (calculated)
12565.7 Da
IEP (calculated)
9.924
GRAVY (calculated)
0.695
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MHDFCFTIPY GLLVLVGGIV GYARRGSTAS LAGGAGSGLV LLLAGFVSLK AFEKRRNSYL AFGLETVCAL ALTFVMGKRY LETSKIMPAG VVAVLSALMS
101: LFYLYKIATG GNHIPPKAD
101: LFYLYKIATG GNHIPPKAD
001: MHDFCFTIPY GILLIVGGFI GYLKKGSIAS LAGGAGTGLL VVLAGFISLK AFEKKKTSLL ATLLETVIAA ALTFVMGQRF LQTQKIMPAA LVAGISALMT
101: CFYVYKIATG GNHIPPKAE
101: CFYVYKIATG GNHIPPKAE
Arabidopsis Description
FAX5Protein FATTY ACID EXPORT 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6T7]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.