Factsheet for Zm00001d049001_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d003334_P001
Zm00001d005997_P002
Zm00001d020879_P001
Zm00001d025667_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G57280.1	Zm00001d003334_P001	AT4G26455.1	21798944
AT3G57280.1	Zm00001d005997_P002	AT4G26455.1	21798944
AT3G57280.1	Zm00001d020879_P001	AT4G26455.1	21798944
AT3G57280.1	Zm00001d025667_P001	AT4G26455.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037138_P001	Maize	extracellular	29.15	71.6
Zm00001d036684_P001	Maize	plastid	24.12	49.48
Zm00001d035128_P001	Maize	extracellular	26.13	40.31
Zm00001d031990_P001	Maize	extracellular	25.13	35.21
Zm00001d021040_P001	Maize	golgi, peroxisome, plasma membrane	27.14	31.58
Zm00001d025663_P003	Maize	plastid	34.67	31.51
EES12340	Sorghum	plastid	34.67	31.08
CDX88938	Canola	extracellular	18.09	29.27
TraesCS2D01G331600.1	Wheat	mitochondrion, plastid	32.16	28.96
TraesCS2B01G350900.1	Wheat	plastid	32.66	27.9
Os04t0470300-01	Rice	plastid	31.16	27.8
TraesCS2A01G331300.1	Wheat	plastid	32.16	27.47
HORVU2Hr1G081780.5	Barley	plastid	31.66	25.4
Solyc04g016440.2.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane, plastid	17.09	23.61
Zm00001d007235_P001	Maize	plasma membrane	26.63	23.35
Bra014634.1-P	Field mustard	extracellular	18.59	23.12
CDY30992	Canola	plastid	20.1	22.86
Zm00001d013817_P001	Maize	endoplasmic reticulum, extracellular, vacuole	13.07	21.67
CDX67684	Canola	plastid	24.12	21.24
PGSC0003DMT400021095	Potato	cytosol, nucleus, plasma membrane	20.1	20.83
Zm00001d018927_P001	Maize	mitochondrion	27.14	20.38
AT3G57280.1	Thale cress	plastid	23.12	20.35
CDY33831	Canola	plastid	23.12	20.18
Bra007316.1-P	Field mustard	plastid	21.11	19.35
CDY06118	Canola	plastid	21.11	19.27
GSMUA_Achr4P01650_001	Banana	mitochondrion	19.6	19.21
CDX72054	Canola	plastid	20.1	18.02
GSMUA_Achr9P12790_001	Banana	plastid	21.61	17.34
Solyc10g079260.1.1	Tomato	plastid	19.6	16.96
GSMUA_Achr3P04170_001	Banana	plastid	20.6	16.6
VIT_00s0252g00030.t01	Wine grape	plastid	19.1	16.59
PGSC0003DMT400033126	Potato	plastid	18.59	16.23
Zm00001d033054_P001	Maize	mitochondrion	15.58	15.98
KRG95172	Soybean	mitochondrion	17.59	15.22
KRH66851	Soybean	plastid	17.09	14.78
Zm00001d045615_P001	Maize	cytosol, endoplasmic reticulum, plastid	27.64	12.53

Protein Annotations

EnsemblPlants:Zm00001d049001_P001	EnsemblPlants:Zm00001d049001_T001	EnsemblPlantsGene:Zm00001d049001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:TMEM14	PANTHER:PTHR12668	PANTHER:PTHR12668:SF16	PFAM:PF03647	ProteinID:AQK49349.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI00084516B7	UniProt:A0A1D6PRK5	MapMan:5.8.3	:	:

Description

Protein FATTY ACID EXPORT 1 chloroplastic

Coordinates

chr4:-:12228923..12230158

Molecular Weight (calculated)

21633.5 Da

IEP (calculated)

8.785

GRAVY (calculated)

0.358

Length

199 amino acids

Sequence
(BLAST)

001: MIPRRALFPL ACHNRSNAPP PTRTLASIPA AEAERECGAQ DARVSHDDTA ALVEEPTSLA ELPRWRLRSM WELTSALNFL HVFRPLLNIA VGVDKWNNGT
101: SFGIAGGLLF SMGLLGYIFS RSTISLVLGI APGLATLLLG TLSLKFLRSG RSSFLLILAQ AALQSVVSTP MCYLREEIPQ VSICSFVFVI HCPSIQKAN

Best Arabidopsis Sequence Match ( AT3G57280.1 )
(BLAST)

001: MASQISQLAC FSSTNRQFHF QSRSFPCPMI RPQSFVVKSV DGNSSETPAS LSYTAEVSKP VVEKTSKPYS TVDETATNKE SITEPVEEDV ATQPIRAAKI
101: HDFCFGIPYG GLVVSGGLLG FAFSRNLTSL STGVLYGGGL LALSTLSLKI WREGKSSFPY ILGQAVLSAV VFWKNFTAYS MTKKLFPAGV FAVISACMLC
201: FYSYVVLSGG NPPPKKLKPS ATSPSY

Arabidopsis Description

FAX1Protein FATTY ACID EXPORT 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93V66]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.