Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- golgi 4
- plasma membrane 7
- endoplasmic reticulum 4
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d003334_P001 | |
| Zm00001d005997_P002 | |
| Zm00001d020879_P001 | |
| Zm00001d025667_P001 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d035128_P001 | Maize | extracellular | 35.24 | 62.02 |
| Zm00001d031990_P001 | Maize | extracellular | 33.92 | 54.23 |
| Zm00001d037138_P001 | Maize | extracellular | 18.06 | 50.62 |
| Zm00001d036684_P001 | Maize | plastid | 18.94 | 44.33 |
| Zm00001d025663_P003 | Maize | plastid | 37.0 | 38.36 |
| EES12340 | Sorghum | plastid | 36.56 | 37.39 |
| TraesCS2D01G331600.1 | Wheat | mitochondrion, plastid | 32.16 | 33.03 |
| Os04t0470300-01 | Rice | plastid | 31.28 | 31.84 |
| TraesCS2A01G331300.1 | Wheat | plastid | 32.16 | 31.33 |
| TraesCS2B01G350900.1 | Wheat | plastid | 32.16 | 31.33 |
| CDX88938 | Canola | extracellular | 16.74 | 30.89 |
| Zm00001d021040_P001 | Maize | golgi, peroxisome, plasma membrane | 21.59 | 28.66 |
| HORVU2Hr1G081780.5 | Barley | plastid | 30.84 | 28.23 |
| Bra014634.1-P | Field mustard | extracellular | 18.94 | 26.88 |
| Zm00001d049001_P001 | Maize | mitochondrion | 23.35 | 26.63 |
| Solyc04g016440.2.1 | Tomato | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 16.3 | 25.69 |
| CDY30992 | Canola | plastid | 17.18 | 22.29 |
| Zm00001d013817_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 11.01 | 20.83 |
| PGSC0003DMT400021095 | Potato | cytosol, nucleus, plasma membrane | 17.18 | 20.31 |
| Bra007316.1-P | Field mustard | plastid | 18.06 | 18.89 |
| Zm00001d018927_P001 | Maize | mitochondrion | 22.03 | 18.87 |
| CDX67684 | Canola | plastid | 18.5 | 18.58 |
| AT3G57280.1 | Thale cress | plastid | 18.5 | 18.58 |
| CDX72054 | Canola | plastid | 18.06 | 18.47 |
| CDY33831 | Canola | plastid | 18.5 | 18.42 |
| CDY06118 | Canola | plastid | 17.62 | 18.35 |
| VIT_00s0252g00030.t01 | Wine grape | plastid | 17.18 | 17.03 |
| Solyc10g079260.1.1 | Tomato | plastid | 17.18 | 16.96 |
| GSMUA_Achr9P12790_001 | Banana | plastid | 18.5 | 16.94 |
| GSMUA_Achr3P04170_001 | Banana | plastid | 18.06 | 16.6 |
| PGSC0003DMT400033126 | Potato | plastid | 16.3 | 16.23 |
| KRH66851 | Soybean | plastid | 16.3 | 16.09 |
| KRG95172 | Soybean | mitochondrion | 16.3 | 16.09 |
| GSMUA_Achr4P01650_001 | Banana | mitochondrion | 13.22 | 14.78 |
| Zm00001d033054_P001 | Maize | mitochondrion | 11.01 | 12.89 |
| Zm00001d045615_P001 | Maize | cytosol, endoplasmic reticulum, plastid | 21.59 | 11.16 |
Protein Annotations
| EnsemblPlants:Zm00001d007235_P001 | EnsemblPlants:Zm00001d007235_T001 | EnsemblPlantsGene:Zm00001d007235 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:TMEM14 | PANTHER:PTHR12668 | PANTHER:PTHR12668:SF16 | PFAM:PF03647 | ProteinID:ONM26395.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI000842718C | UniProt:A0A1D6F522 | MapMan:5.8.3 | : | : |
Description
Protein FATTY ACID EXPORT 1 chloroplastic
Coordinates
chr2:-:225343067..225344000
Molecular Weight (calculated)
25651.1 Da
IEP (calculated)
9.579
GRAVY (calculated)
0.596
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLLGYIFSR STISLVLGIA PGLATLLLGT LNLKFWRSGG SSFLLILAQA AISAFLAWKY SHAYFLTNRL LPWGFYASLR SFSLYRPSPS KAFSPFGQRS
101: DGLSCLKIMQ HCNGLFLRLC ATCGRKSRKY MLFCFCDPLP KYLEGKLDFD VSILKLPISN KSSIESVFYV FIMMDKVHHD SRIFLHHGYL VLIHPFCAPI
201: ILVNLSIELG LLLISFLCLL TWDNLIF
101: DGLSCLKIMQ HCNGLFLRLC ATCGRKSRKY MLFCFCDPLP KYLEGKLDFD VSILKLPISN KSSIESVFYV FIMMDKVHHD SRIFLHHGYL VLIHPFCAPI
201: ILVNLSIELG LLLISFLCLL TWDNLIF
001: MASQISQLAC FSSTNRQFHF QSRSFPCPMI RPQSFVVKSV DGNSSETPAS LSYTAEVSKP VVEKTSKPYS TVDETATNKE SITEPVEEDV ATQPIRAAKI
101: HDFCFGIPYG GLVVSGGLLG FAFSRNLTSL STGVLYGGGL LALSTLSLKI WREGKSSFPY ILGQAVLSAV VFWKNFTAYS MTKKLFPAGV FAVISACMLC
201: FYSYVVLSGG NPPPKKLKPS ATSPSY
101: HDFCFGIPYG GLVVSGGLLG FAFSRNLTSL STGVLYGGGL LALSTLSLKI WREGKSSFPY ILGQAVLSAV VFWKNFTAYS MTKKLFPAGV FAVISACMLC
201: FYSYVVLSGG NPPPKKLKPS ATSPSY
Arabidopsis Description
FAX1Protein FATTY ACID EXPORT 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93V66]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.