Factsheet for Zm00001d035128_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d003334_P001
Zm00001d005997_P002
Zm00001d020879_P001
Zm00001d025667_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G57280.1	Zm00001d003334_P001	AT4G26455.1	21798944
AT3G57280.1	Zm00001d005997_P002	AT4G26455.1	21798944
AT3G57280.1	Zm00001d020879_P001	AT4G26455.1	21798944
AT3G57280.1	Zm00001d025667_P001	AT4G26455.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031990_P001	Maize	extracellular	89.92	81.69
Zm00001d037138_P001	Maize	extracellular	31.01	49.38
Zm00001d036684_P001	Maize	plastid	32.56	43.3
Zm00001d025663_P003	Maize	plastid	61.24	36.07
Zm00001d007235_P001	Maize	plasma membrane	62.02	35.24
EES12340	Sorghum	plastid	60.47	35.14
TraesCS2D01G331600.1	Wheat	mitochondrion, plastid	53.49	31.22
Os04t0470300-01	Rice	plastid	53.49	30.94
CDX88938	Canola	extracellular	28.68	30.08
TraesCS2A01G331300.1	Wheat	plastid	53.49	29.61
TraesCS2B01G350900.1	Wheat	plastid	53.49	29.61
Zm00001d021040_P001	Maize	golgi, peroxisome, plasma membrane	36.43	27.49
HORVU2Hr1G081780.5	Barley	plastid	51.94	27.02
Zm00001d049001_P001	Maize	mitochondrion	40.31	26.13
Bra014634.1-P	Field mustard	extracellular	31.78	25.62
Solyc04g016440.2.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane, plastid	27.13	24.31
CDY30992	Canola	plastid	30.23	22.29
Zm00001d013817_P001	Maize	endoplasmic reticulum, extracellular, vacuole	18.6	20.0
PGSC0003DMT400021095	Potato	cytosol, nucleus, plasma membrane	29.46	19.79
Bra007316.1-P	Field mustard	plastid	31.01	18.43
Zm00001d018927_P001	Maize	mitochondrion	37.21	18.11
CDX72054	Canola	plastid	31.01	18.02
CDY06118	Canola	plastid	30.23	17.89
AT3G57280.1	Thale cress	plastid	31.01	17.7
CDX67684	Canola	plastid	30.23	17.26
CDY33831	Canola	plastid	30.23	17.11
VIT_00s0252g00030.t01	Wine grape	plastid	30.23	17.03
GSMUA_Achr9P12790_001	Banana	plastid	32.56	16.94
Solyc10g079260.1.1	Tomato	plastid	29.46	16.52
GSMUA_Achr3P04170_001	Banana	plastid	31.01	16.19
KRH66851	Soybean	plastid	28.68	16.09
KRG95172	Soybean	mitochondrion	27.91	15.65
PGSC0003DMT400033126	Potato	plastid	27.13	15.35
GSMUA_Achr4P01650_001	Banana	mitochondrion	24.03	15.27
Zm00001d033054_P001	Maize	mitochondrion	18.6	12.37
Zm00001d045615_P001	Maize	cytosol, endoplasmic reticulum, plastid	36.43	10.71

Protein Annotations

EnsemblPlants:Zm00001d035128_P001	EnsemblPlants:Zm00001d035128_T001	EnsemblPlantsGene:Zm00001d035128	Gene3D:1.20.58.1140	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:TMEM14	PANTHER:PTHR12668	PANTHER:PTHR12668:SF16	PFAM:PF03647	ProteinID:AQK78394.1
TMHMM:TMhelix	UniParc:UPI0008430E87	UniProt:A0A1D6LEM0	MapMan:5.8.3	:	:

Description

Protein FATTY ACID EXPORT 1 chloroplastic

Coordinates

chr6:-:6324335..6324940

Molecular Weight (calculated)

14443.9 Da

IEP (calculated)

11.567

GRAVY (calculated)

0.335

Length

129 amino acids

Sequence
(BLAST)

001: MGLLGYIFSR STISLVLGIA PGLATLVLGT LNMKFWRSGR SSFLLILAQA AISAFLAWKY SHAYFLTNRL LPWGFYTSLR SFSLYRTSPS KAFFPFGQRS
101: DGLSCLKIMQ HSNGLFLRLC ATCGRKSRK

Best Arabidopsis Sequence Match ( AT3G57280.1 )
(BLAST)

001: MASQISQLAC FSSTNRQFHF QSRSFPCPMI RPQSFVVKSV DGNSSETPAS LSYTAEVSKP VVEKTSKPYS TVDETATNKE SITEPVEEDV ATQPIRAAKI
101: HDFCFGIPYG GLVVSGGLLG FAFSRNLTSL STGVLYGGGL LALSTLSLKI WREGKSSFPY ILGQAVLSAV VFWKNFTAYS MTKKLFPAGV FAVISACMLC
201: FYSYVVLSGG NPPPKKLKPS ATSPSY

Arabidopsis Description

FAX1Protein FATTY ACID EXPORT 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93V66]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.