Factsheet for Zm00001d036684_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
extracellular 3
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d003334_P001
Zm00001d005997_P002
Zm00001d020879_P001
Zm00001d025667_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G57280.1	Zm00001d003334_P001	AT4G26455.1	21798944
AT3G57280.1	Zm00001d005997_P002	AT4G26455.1	21798944
AT3G57280.1	Zm00001d020879_P001	AT4G26455.1	21798944
AT3G57280.1	Zm00001d025667_P001	AT4G26455.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037138_P001	Maize	extracellular	53.61	64.2
Zm00001d035128_P001	Maize	extracellular	43.3	32.56
Zm00001d031990_P001	Maize	extracellular	44.33	30.28
Zm00001d025663_P003	Maize	plastid	55.67	24.66
CDX88938	Canola	extracellular	30.93	24.39
Zm00001d049001_P001	Maize	mitochondrion	49.48	24.12
EES12340	Sorghum	plastid	54.64	23.87
TraesCS2D01G331600.1	Wheat	mitochondrion, plastid	51.55	22.62
Os04t0470300-01	Rice	plastid	51.55	22.42
Zm00001d021040_P001	Maize	golgi, peroxisome, plasma membrane	39.18	22.22
Solyc04g016440.2.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane, plastid	31.96	21.53
TraesCS2B01G350900.1	Wheat	plastid	51.55	21.46
TraesCS2A01G331300.1	Wheat	plastid	51.55	21.46
Bra014634.1-P	Field mustard	extracellular	34.02	20.62
HORVU2Hr1G081780.5	Barley	plastid	49.48	19.35
Zm00001d007235_P001	Maize	plasma membrane	44.33	18.94
CDY30992	Canola	plastid	34.02	18.86
Zm00001d013817_P001	Maize	endoplasmic reticulum, extracellular, vacuole	22.68	18.33
PGSC0003DMT400021095	Potato	cytosol, nucleus, plasma membrane	36.08	18.23
Bra007316.1-P	Field mustard	plastid	35.05	15.67
CDY06118	Canola	plastid	35.05	15.6
CDX67684	Canola	plastid	36.08	15.49
AT3G57280.1	Thale cress	plastid	36.08	15.49
CDY33831	Canola	plastid	36.08	15.35
CDX72054	Canola	plastid	35.05	15.32
VIT_00s0252g00030.t01	Wine grape	plastid	36.08	15.28
GSMUA_Achr4P01650_001	Banana	mitochondrion	31.96	15.27
PGSC0003DMT400033126	Potato	plastid	34.02	14.47
Solyc10g079260.1.1	Tomato	plastid	34.02	14.35
GSMUA_Achr3P04170_001	Banana	plastid	36.08	14.17
Zm00001d018927_P001	Maize	mitochondrion	38.14	13.96
GSMUA_Achr9P12790_001	Banana	plastid	35.05	13.71
KRG95172	Soybean	mitochondrion	31.96	13.48
KRH66851	Soybean	plastid	30.93	13.04
Zm00001d033054_P001	Maize	mitochondrion	22.68	11.34
Zm00001d045615_P001	Maize	cytosol, endoplasmic reticulum, plastid	39.18	8.66

Protein Annotations

EnsemblPlants:Zm00001d036684_P001	EnsemblPlants:Zm00001d036684_T001	EnsemblPlantsGene:Zm00001d036684	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:TMEM14	PANTHER:PTHR12668	PANTHER:PTHR12668:SF16	PFAM:PF03647	ProteinID:AQK81729.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI00084371DC	UniProt:A0A1D6LQG7	MapMan:5.8.3	:	:

Description

Protein FATTY ACID EXPORT 1 chloroplastic

Coordinates

chr6:+:97508062..97510725

Molecular Weight (calculated)

10483.2 Da

IEP (calculated)

10.847

GRAVY (calculated)

0.863

Length

97 amino acids

Sequence
(BLAST)

1: MPSISSFPEA APGGLLFSMG LLGYIFSRST ISLVLGITPG LATLLLGTLS LKFWRSGRSS FLLILAQADM DLGGFLHIRK AGRAFCTQFF LLTVVLW

Best Arabidopsis Sequence Match ( AT3G57280.1 )
(BLAST)

001: MASQISQLAC FSSTNRQFHF QSRSFPCPMI RPQSFVVKSV DGNSSETPAS LSYTAEVSKP VVEKTSKPYS TVDETATNKE SITEPVEEDV ATQPIRAAKI
101: HDFCFGIPYG GLVVSGGLLG FAFSRNLTSL STGVLYGGGL LALSTLSLKI WREGKSSFPY ILGQAVLSAV VFWKNFTAYS MTKKLFPAGV FAVISACMLC
201: FYSYVVLSGG NPPPKKLKPS ATSPSY

Arabidopsis Description

FAX1Protein FATTY ACID EXPORT 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93V66]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.