Factsheet for Zm00001d045615_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
endoplasmic reticulum 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plastid
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d003334_P001
Zm00001d005997_P002
Zm00001d020879_P001
Zm00001d025667_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G57280.1	Zm00001d003334_P001	AT4G26455.1	21798944
AT3G57280.1	Zm00001d005997_P002	AT4G26455.1	21798944
AT3G57280.1	Zm00001d020879_P001	AT4G26455.1	21798944
AT3G57280.1	Zm00001d025667_P001	AT4G26455.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021040_P001	Maize	golgi, peroxisome, plasma membrane	36.67	94.15
Zm00001d018927_P001	Maize	mitochondrion	37.81	62.64
EER98049	Sorghum	plastid	34.17	59.52
Os06t0301100-01	Rice	plastid	26.2	48.52
TraesCS7A01G219900.2	Wheat	plastid	26.42	48.13
TraesCS7B01G127500.2	Wheat	plastid	26.2	47.92
Zm00001d037138_P001	Maize	extracellular	8.66	46.91
TraesCS7D01G222200.2	Wheat	plastid	25.74	46.89
HORVU7Hr1G045420.1	Barley	cytosol, peroxisome	27.79	40.13
Zm00001d036684_P001	Maize	plastid	8.66	39.18
Solyc04g016440.2.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane, plastid	12.76	38.89
Zm00001d035128_P001	Maize	extracellular	10.71	36.43
Zm00001d025663_P003	Maize	plastid	17.31	34.7
PGSC0003DMT400021095	Potato	cytosol, nucleus, plasma membrane	14.81	33.85
CDX88938	Canola	extracellular	9.34	33.33
CDY30992	Canola	plastid	12.98	32.57
Zm00001d031990_P001	Maize	extracellular	10.48	32.39
Bra007316.1-P	Field mustard	plastid	14.58	29.49
Solyc10g079260.1.1	Tomato	plastid	15.26	29.13
CDY06118	Canola	plastid	14.12	28.44
AT3G57280.1	Thale cress	plastid	14.58	28.32
PGSC0003DMT400033126	Potato	plastid	14.58	28.07
Zm00001d049001_P001	Maize	mitochondrion	12.53	27.64
CDY33831	Canola	plastid	14.35	27.63
CDX67684	Canola	plastid	14.12	27.43
GSMUA_Achr3P04170_001	Banana	plastid	15.26	27.13
GSMUA_Achr9P12790_001	Banana	plastid	15.26	27.02
Bra014634.1-P	Field mustard	extracellular	9.79	26.88
CDX72054	Canola	plastid	13.44	26.58
KRG95172	Soybean	mitochondrion	13.67	26.09
Zm00001d013817_P001	Maize	endoplasmic reticulum, extracellular, vacuole	7.06	25.83
VIT_00s0252g00030.t01	Wine grape	plastid	13.44	25.76
KRH66851	Soybean	plastid	13.44	25.65
GSMUA_Achr4P01650_001	Banana	mitochondrion	10.71	23.15
Zm00001d007235_P001	Maize	plasma membrane	11.16	21.59
Zm00001d033054_P001	Maize	mitochondrion	8.66	19.59

Protein Annotations

EnsemblPlants:Zm00001d045615_P001	EnsemblPlants:Zm00001d045615_T001	EnsemblPlantsGene:Zm00001d045615	Gene3D:1.20.58.1140	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:TMEM14	PANTHER:PTHR12668	PANTHER:PTHR12668:SF18	PFAM:PF03647	ProteinID:AQL02823.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0008442085	UniProt:A0A1D6NXR5	MapMan:5.8.3	:

Description

Protein FATTY ACID EXPORT 1 chloroplastic

Coordinates

chr9:+:28893204..28896517

Molecular Weight (calculated)

47246.9 Da

IEP (calculated)

9.545

GRAVY (calculated)

0.021

Length

439 amino acids

Sequence
(BLAST)

001: MTAAAKDAVA PTVRPGCQRD EATAGCSTRS HCDRLSSDAA AIDHASSSER RKEGEKDQAK FIGGGVRTHL MPSLASNEPS LLRLHVPRLD RAASRRENGG
101: VEWWRVRGAT TSGSESRHQV RFLASRSGRR QEERMASRTS PLVFKRVAGI RTIAESGRFK ASSFHFPIIK LLPALITIAL PLLVLCWPSR VTVHSSSCKC
201: LGFALRLAAE CTILITRTQI PITRGYSVRS KILLLGKFIV YASGSTCQFV STSVPCANTI NWTAPWTTMC VNADYTTPAD SVATSEQTGG EAEATLETGG
301: EAAATLEQTG GETEEPTIVA PANEYTEQEA APQQKCAKIH DFCLGIPFGG LLLSMGLIGF LFWRSPASLT FGVAPGLAIL ALAVLSLKVW RSGKSSLLFI
401: LAQAGIAAAV AWKHGQAYTT TRKLLPWGFY VALRCSFIS

Best Arabidopsis Sequence Match ( AT3G57280.1 )
(BLAST)

001: MASQISQLAC FSSTNRQFHF QSRSFPCPMI RPQSFVVKSV DGNSSETPAS LSYTAEVSKP VVEKTSKPYS TVDETATNKE SITEPVEEDV ATQPIRAAKI
101: HDFCFGIPYG GLVVSGGLLG FAFSRNLTSL STGVLYGGGL LALSTLSLKI WREGKSSFPY ILGQAVLSAV VFWKNFTAYS MTKKLFPAGV FAVISACMLC
201: FYSYVVLSGG NPPPKKLKPS ATSPSY

Arabidopsis Description

FAX1Protein FATTY ACID EXPORT 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93V66]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.