Factsheet for Os06t0301100-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os04t0471300-01
Os08t0497900-01
Os09t0481300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G57280.1	Os04t0471300-01	AT4G26455.1	21798944
AT3G57280.1	Os08t0497900-01	AT4G26455.1	21798944
AT3G57280.1	Os09t0481300-01	AT4G26455.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G222200.2	Wheat	plastid	72.57	71.37
TraesCS7B01G127500.2	Wheat	plastid	71.73	70.83
TraesCS7A01G219900.2	Wheat	plastid	70.89	69.71
Zm00001d021040_P001	Maize	golgi, peroxisome, plasma membrane	42.19	58.48
EER98049	Sorghum	plastid	59.07	55.56
HORVU7Hr1G045420.1	Barley	cytosol, peroxisome	70.89	55.26
Solyc04g016440.2.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane, plastid	29.96	49.31
Zm00001d018927_P001	Maize	mitochondrion	54.01	48.3
CDX88938	Canola	extracellular	23.63	45.53
Os04t0470300-01	Rice	plastid	42.19	44.84
CDY30992	Canola	plastid	30.8	41.71
PGSC0003DMT400021095	Potato	cytosol, nucleus, plasma membrane	31.22	38.54
CDX72054	Canola	plastid	35.87	38.29
Bra007316.1-P	Field mustard	plastid	34.18	37.33
Bra014634.1-P	Field mustard	extracellular	24.89	36.88
CDY06118	Canola	plastid	33.76	36.7
GSMUA_Achr3P04170_001	Banana	plastid	37.55	36.03
PGSC0003DMT400033126	Potato	plastid	34.18	35.53
GSMUA_Achr9P12790_001	Banana	plastid	37.13	35.48
AT3G57280.1	Thale cress	plastid	33.33	34.96
KRG95172	Soybean	mitochondrion	33.76	34.78
CDX67684	Canola	plastid	32.91	34.51
KRH66851	Soybean	plastid	33.33	34.35
VIT_00s0252g00030.t01	Wine grape	plastid	32.49	33.62
Solyc10g079260.1.1	Tomato	plastid	32.49	33.48
CDY33831	Canola	plastid	32.07	33.33
Os03t0568500-01	Rice	endoplasmic reticulum, extracellular	15.19	30.25
GSMUA_Achr4P01650_001	Banana	mitochondrion	22.78	26.6
Zm00001d045615_P001	Maize	cytosol, endoplasmic reticulum, plastid	48.52	26.2

Protein Annotations

EMBL:AK242142	EnsemblPlants:Os06t0301100-01	EnsemblPlantsGene:Os06g0301100	EntrezGene:4340827	Gene3D:1.20.58.1140	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:TMEM14	PANTHER:PTHR12668	PANTHER:PTHR12668:SF18	PFAM:PF03647
ProteinID:BAS97383.1	ProteinID:EEE65574.1	RefSeq:XP_015641040.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI000188B031
UniProt:B7F9A6	MapMan:5.8.3	:	:	:	:

Description

Similar to OSIGBa0124N08.6 protein. (Os06t0301100-01)

Coordinates

chr6:-:11244763..11248655

Molecular Weight (calculated)

24799.3 Da

IEP (calculated)

10.061

GRAVY (calculated)

0.393

Length

237 amino acids

Sequence
(BLAST)

001: MAAAVAAQLR GPSAAAARRW PAPSGGVLRF APLATSTVPA SIARGSLRGV PAGVVLPKPL IAMCMKAEYT SSPVDPNAVA EHTEDENQQP TTVSPTNAEI
101: DIDQEAVPQH KGAIIHDFCL GIPFGGILFS MGLVGFLFWR STVSLTFGVA PGLAILALGV LSLKVWRSGK SSLPFILAQA AVAAAVAWKH FQAYTTTKKL
201: LPWAFYTALS AAMICFYSYV LLAGGNPPPK KKAAVAQ

Best Arabidopsis Sequence Match ( AT3G57280.1 )
(BLAST)

001: MASQISQLAC FSSTNRQFHF QSRSFPCPMI RPQSFVVKSV DGNSSETPAS LSYTAEVSKP VVEKTSKPYS TVDETATNKE SITEPVEEDV ATQPIRAAKI
101: HDFCFGIPYG GLVVSGGLLG FAFSRNLTSL STGVLYGGGL LALSTLSLKI WREGKSSFPY ILGQAVLSAV VFWKNFTAYS MTKKLFPAGV FAVISACMLC
201: FYSYVVLSGG NPPPKKLKPS ATSPSY

Arabidopsis Description

FAX1Protein FATTY ACID EXPORT 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93V66]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.