Factsheet for Zm00001d021040_P001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plasma membrane, peroxisome

Predictor Summary:

golgi 2
extracellular 1
plasma membrane 2
endoplasmic reticulum 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, plasma membrane
Any Predictor:	peroxisome, secretory
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d003334_P001
Zm00001d005997_P002
Zm00001d020879_P001
Zm00001d025667_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G57280.1	Zm00001d003334_P001	AT4G26455.1	21798944
AT3G57280.1	Zm00001d005997_P002	AT4G26455.1	21798944
AT3G57280.1	Zm00001d020879_P001	AT4G26455.1	21798944
AT3G57280.1	Zm00001d025667_P001	AT4G26455.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018927_P001	Maize	mitochondrion	95.32	61.51
EER98049	Sorghum	plastid	77.19	52.38
Zm00001d037138_P001	Maize	extracellular	22.22	46.91
Os06t0301100-01	Rice	plastid	58.48	42.19
TraesCS7A01G219900.2	Wheat	plastid	58.48	41.49
TraesCS7D01G222200.2	Wheat	plastid	58.48	41.49
TraesCS7B01G127500.2	Wheat	plastid	57.89	41.25
Zm00001d036684_P001	Maize	plastid	22.22	39.18
Solyc04g016440.2.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane, plastid	32.75	38.89
Zm00001d045615_P001	Maize	cytosol, endoplasmic reticulum, plastid	94.15	36.67
Zm00001d035128_P001	Maize	extracellular	27.49	36.43
PGSC0003DMT400021095	Potato	cytosol, nucleus, plasma membrane	38.6	34.38
Zm00001d025663_P003	Maize	plastid	42.69	33.33
CDX88938	Canola	extracellular	23.98	33.33
HORVU7Hr1G045420.1	Barley	cytosol, peroxisome	57.89	32.57
Zm00001d031990_P001	Maize	extracellular	26.9	32.39
CDY30992	Canola	plastid	31.58	30.86
Bra007316.1-P	Field mustard	plastid	36.26	28.57
Solyc10g079260.1.1	Tomato	plastid	38.01	28.26
CDY06118	Canola	plastid	35.09	27.52
CDX67684	Canola	plastid	36.26	27.43
AT3G57280.1	Thale cress	plastid	36.26	27.43
Zm00001d049001_P001	Maize	mitochondrion	31.58	27.14
Bra014634.1-P	Field mustard	extracellular	25.15	26.88
PGSC0003DMT400033126	Potato	plastid	35.09	26.32
CDY33831	Canola	plastid	35.09	26.32
Zm00001d013817_P001	Maize	endoplasmic reticulum, extracellular, vacuole	18.13	25.83
GSMUA_Achr3P04170_001	Banana	plastid	36.84	25.51
KRG95172	Soybean	mitochondrion	33.92	25.22
KRH66851	Soybean	plastid	33.33	24.78
CDX72054	Canola	plastid	32.16	24.77
VIT_00s0252g00030.t01	Wine grape	plastid	32.16	24.02
GSMUA_Achr9P12790_001	Banana	plastid	33.92	23.39
GSMUA_Achr4P01650_001	Banana	mitochondrion	25.73	21.67
Zm00001d007235_P001	Maize	plasma membrane	28.66	21.59
Zm00001d033054_P001	Maize	mitochondrion	22.81	20.1

Protein Annotations

EnsemblPlants:Zm00001d021040_P001	EnsemblPlants:Zm00001d021040_T001	EnsemblPlantsGene:Zm00001d021040	Gene3D:1.20.58.1140	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:TMEM14	PANTHER:PTHR12668	PANTHER:PTHR12668:SF18	PFAM:PF03647	ProteinID:ONM56199.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0008457AFE	UniProt:A0A1D6I827	MapMan:5.8.3	:

Description

Protein FATTY ACID EXPORT 1 chloroplastic

Coordinates

chr7:-:141043659..141044789

Molecular Weight (calculated)

17987.6 Da

IEP (calculated)

4.675

GRAVY (calculated)

0.287

Length

171 amino acids

Sequence
(BLAST)

001: MCVNADYTTP ADSVATSEQT GGEAEATLET GGEAAATLEQ TGGETEEPTI VAPANEYTEQ EAAPQQKCAK IHDFCLGIPF GGLLLSMGLI GFLFWRSPAS
101: LTFGVAPGLA ILALAVLSLK VWRSGKSSLL FILAQAGIAA AVAWKHGQAY TTTRKLLPWG FYVALRCSFI S

Best Arabidopsis Sequence Match ( AT3G57280.1 )
(BLAST)

001: MASQISQLAC FSSTNRQFHF QSRSFPCPMI RPQSFVVKSV DGNSSETPAS LSYTAEVSKP VVEKTSKPYS TVDETATNKE SITEPVEEDV ATQPIRAAKI
101: HDFCFGIPYG GLVVSGGLLG FAFSRNLTSL STGVLYGGGL LALSTLSLKI WREGKSSFPY ILGQAVLSAV VFWKNFTAYS MTKKLFPAGV FAVISACMLC
201: FYSYVVLSGG NPPPKKLKPS ATSPSY

Arabidopsis Description

FAX1Protein FATTY ACID EXPORT 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93V66]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.