Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 1
- golgi 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
22065420
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER96942 | Sorghum | cytosol, golgi, nucleus, plastid | 89.03 | 88.38 |
| Zm00001d020879_P001 | Maize | cytosol, golgi, nucleus, plastid | 60.59 | 81.3 |
| TraesCS5A01G257000.1 | Wheat | cytosol, golgi, nucleus, plastid | 59.48 | 58.72 |
| TraesCS5B01G256500.1 | Wheat | cytosol, golgi, nucleus, plastid | 59.29 | 58.42 |
| HORVU5Hr1G071910.1 | Barley | nucleus | 59.29 | 58.21 |
| Os09t0481300-01 | Rice | nucleus | 56.88 | 58.06 |
| TraesCS5D01G265600.1 | Wheat | nucleus | 59.29 | 57.79 |
| Zm00001d003334_P001 | Maize | cytosol, nucleus, plastid | 17.1 | 29.87 |
| GSMUA_Achr10P... | Banana | cytosol | 27.51 | 29.37 |
| GSMUA_Achr4P01630_001 | Banana | cytosol, golgi, nucleus | 32.34 | 29.24 |
| GSMUA_Achr3P04120_001 | Banana | nucleus | 31.78 | 28.79 |
| Bra039387.1-P | Field mustard | cytosol, golgi, nucleus, plastid | 18.96 | 25.5 |
| Solyc07g066170.2.1 | Tomato | nucleus | 15.61 | 25.07 |
| Bra002835.1-P | Field mustard | cytosol, golgi, nucleus | 12.83 | 25.0 |
| CDY43354 | Canola | cytosol, golgi, nucleus | 18.4 | 24.81 |
| CDY32806 | Canola | cytosol, golgi, nucleus | 12.83 | 24.73 |
| CDY17403 | Canola | nucleus | 12.64 | 24.64 |
| CDX89333 | Canola | nucleus | 21.56 | 23.43 |
| Bra026434.1-P | Field mustard | nucleus | 21.56 | 23.43 |
| CDX94330 | Canola | nucleus | 21.38 | 23.42 |
| AT5G56210.1 | Thale cress | nucleus | 22.12 | 23.38 |
| VIT_19s0015g01790.t01 | Wine grape | nucleus | 26.58 | 23.29 |
| PGSC0003DMT400022426 | Potato | nucleus | 25.09 | 23.04 |
| CDX75706 | Canola | cytosol, golgi, nucleus | 17.84 | 22.86 |
| KRH56393 | Soybean | cytosol | 24.91 | 22.83 |
| PGSC0003DMT400056956 | Potato | nucleus | 25.28 | 22.74 |
| AT4G26455.1 | Thale cress | nucleus | 20.63 | 22.7 |
| CDY24192 | Canola | plastid | 12.27 | 21.78 |
| KRH62532 | Soybean | endoplasmic reticulum | 23.61 | 21.71 |
| Bra001502.1-P | Field mustard | nucleus, plastid | 17.29 | 21.04 |
| Zm00001d025667_P001 | Maize | cytosol | 18.96 | 20.9 |
| CDX82542 | Canola | plastid | 17.1 | 20.77 |
| AT3G13360.2 | Thale cress | extracellular, plasma membrane, vacuole | 17.66 | 18.34 |
Protein Annotations
| EMBL:BT053950 | EnsemblPlants:Zm00001d005997_P002 | EnsemblPlants:Zm00001d005997_T002 | EnsemblPlantsGene:Zm00001d005997 | EntrezGene:100279277 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | ncoils:Coil | PANTHER:PTHR34562 | PANTHER:PTHR34562:SF1 | ProteinID:ONM22516.1 |
| SEG:seg | UniParc:UPI0001917139 | UniProt:B7ZXA8 | MapMan:20.4.2.1.2 | : | : |
Description
WPP domain-interacting protein 2
Coordinates
chr2:-:194951357..194954366
Molecular Weight (calculated)
57987.4 Da
IEP (calculated)
4.971
GRAVY (calculated)
-0.559
Length
538 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSGANSIGE SVGESPSLAL APEPQTRPAE PVTKGRGLRR WRRIPREQHQ EGSPGSPGAD TGVGASAGED LAAQLHKRRY GPAADEPKGK QDPAAAEEVE
101: SSVASVESSF VPLEASPPPA PTRLDPNLGH LIATAGFSVG AGGADSDNSD DRTSKLSTAA SAPRHDFSSV GFGRERDRAR SRAPGAAHGK GIRAARVRGA
201: TMRVASSPAE AGNSRSSVES NLRSSNAAHA RRSSAGVTSN GVHKILFPDG HQSDDEPPSG DMRYGTGRFY KENGSIEGRL GNCDSDSNHH TFDEASVGKF
301: ENGGTHSGLD LYGESMALLQ SAQEALENEI QKFVEIRKET DEDSTAHQSE IEWSSSPVEE LNEKIKMLEL KLEEATMLIN ERDSEILELD ALSHVQPQNT
401: VACNNYPLSL QSDVDRLFLE KMEAEIQCFI LTRASQDWKL LTMDQFALNE AQKSLLSDHK SLETKLRHAE NRAMMLEEMV DKLESQCKAL SETSEVLKLQ
501: AGASRASLFC SIQFVLLCIA IGTLLVRFLS SSPEIVPT
101: SSVASVESSF VPLEASPPPA PTRLDPNLGH LIATAGFSVG AGGADSDNSD DRTSKLSTAA SAPRHDFSSV GFGRERDRAR SRAPGAAHGK GIRAARVRGA
201: TMRVASSPAE AGNSRSSVES NLRSSNAAHA RRSSAGVTSN GVHKILFPDG HQSDDEPPSG DMRYGTGRFY KENGSIEGRL GNCDSDSNHH TFDEASVGKF
301: ENGGTHSGLD LYGESMALLQ SAQEALENEI QKFVEIRKET DEDSTAHQSE IEWSSSPVEE LNEKIKMLEL KLEEATMLIN ERDSEILELD ALSHVQPQNT
401: VACNNYPLSL QSDVDRLFLE KMEAEIQCFI LTRASQDWKL LTMDQFALNE AQKSLLSDHK SLETKLRHAE NRAMMLEEMV DKLESQCKAL SETSEVLKLQ
501: AGASRASLFC SIQFVLLCIA IGTLLVRFLS SSPEIVPT
001: MDLESESSVL ESVEDNNGLI GDLDKELNSP VETSPLISKG FGLRKWKRRL RRDLVKDDTS VSMENSKALK RVLSGLVDPN AKQMHLPGPE VRQDSVGSVG
101: SVNSVVGFVM GGESYGNGLA FAAGVDSDNS EDRSSTMSHS WDKHRGKVSG GKSVISSGDS SQQRKSSVEK SNKLRGERIK IEKENSHSSM ESADSRSSNF
201: VFMQGASYSL SSREQGGRRM MDYDDENSDH DAHTSKRKDN VEEEEEETED YSQGDCVEES QIKSNGSSDN LDPLIVAVNS FQTLQEALQK ELQKFQELGK
301: EEPITSLHDG GESSSCIHAG HEGASEASSS YRFGSEKMGE MELTSLDSEI LNLVNNVEHL EIKLEEAKRI LEVKETQIRE LESTINVSET CNGGTEIGIE
401: DIFQQKVEAE IEYIIFSRSV GNLKRRIKLI EEEKTLGLSK LDKAETKAEN LKNQAQDLQN HCVEITEIQE VECLKKRAFK TTRCLLLQLG LLFILYYSLL
501: PEPEIAVPT
101: SVNSVVGFVM GGESYGNGLA FAAGVDSDNS EDRSSTMSHS WDKHRGKVSG GKSVISSGDS SQQRKSSVEK SNKLRGERIK IEKENSHSSM ESADSRSSNF
201: VFMQGASYSL SSREQGGRRM MDYDDENSDH DAHTSKRKDN VEEEEEETED YSQGDCVEES QIKSNGSSDN LDPLIVAVNS FQTLQEALQK ELQKFQELGK
301: EEPITSLHDG GESSSCIHAG HEGASEASSS YRFGSEKMGE MELTSLDSEI LNLVNNVEHL EIKLEEAKRI LEVKETQIRE LESTINVSET CNGGTEIGIE
401: DIFQQKVEAE IEYIIFSRSV GNLKRRIKLI EEEKTLGLSK LDKAETKAEN LKNQAQDLQN HCVEITEIQE VECLKKRAFK TTRCLLLQLG LLFILYYSLL
501: PEPEIAVPT
Arabidopsis Description
WIP2WPP domain-interacting protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH18]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.