Factsheet for Zm00001d016098_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

mitochondrion 4
plasma membrane 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU84732	Sorghum	mitochondrion	87.71	78.34
HORVU3Hr1G026120.1	Barley	mitochondrion, plasma membrane	71.43	68.91
HORVU3Hr1G058570.1	Barley	mitochondrion, plasma membrane	71.43	68.91
Os02t0257200-01	Rice	nucleus, plastid	69.44	68.75
TraesCS3D01G138100.1	Wheat	plasma membrane	71.1	67.3
TraesCS3B01G155100.1	Wheat	mitochondrion, plasma membrane	71.1	67.3
TraesCS3A01G137300.1	Wheat	plasma membrane	70.76	66.77
GSMUA_Achr5P06770_001	Banana	mitochondrion	53.82	53.82
GSMUA_Achr10P...	Banana	mitochondrion	44.85	51.53
VIT_16s0050g02650.t01	Wine grape	mitochondrion, plasma membrane	49.83	51.19
Zm00001d009718_P001	Maize	mitochondrion, plasma membrane	42.19	48.11
Solyc03g007340.2.1	Tomato	mitochondrion, plasma membrane	50.17	47.94
GSMUA_Achr6P22890_001	Banana	mitochondrion, plasma membrane	44.52	47.52
KRH53446	Soybean	mitochondrion, plasma membrane	45.51	46.28
AT5G24130.1	Thale cress	plasma membrane	46.51	44.3
CDX88079	Canola	mitochondrion, plasma membrane	45.85	43.81
CDX80417	Canola	plasma membrane	45.85	43.81
Bra009736.1-P	Field mustard	mitochondrion, plasma membrane	45.85	43.81
PGSC0003DMT400023438	Potato	plasma membrane	28.24	41.06

Protein Annotations

EnsemblPlants:Zm00001d016098_P002	EnsemblPlants:Zm00001d016098_T002	EnsemblPlantsGene:Zm00001d016098	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR34967	PANTHER:PTHR34967:SF1	ProteinID:AQK70055.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002218A84
UniProt:A0A1D6H5F8	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr5:-:144501165..144502820

Molecular Weight (calculated)

32030.8 Da

IEP (calculated)

10.299

GRAVY (calculated)

0.456

Length

301 amino acids

Sequence
(BLAST)

001: MVKLATAREC RAYSLGAGAG SGTALRNRWE YINAGVYIFA AVLLVGGFLA QLLPWGGPSS PGLVVAAIGL AGLLAVNTHD LLAHAAGVDY RLGMVVGLDA
101: QMGLVELGVP AVQIVGTVLM LVAVVFFVIQ MERGYRHSLA MHGLNLLIAG PALWCLGSVQ NICQFYERAS GHVQLLQKSV QIPLLLGSTL FLIAGIVNRH
201: DRRSRHSGFV LLGRSWAWFC LFGSLLFLAG GLLNLLKVFK TQQMGGRGLE KLRGGTQERL ALEREGKVPL ILEHGHGGRR GPAIPPPPPG SYKDALVSSA
301: S

Best Arabidopsis Sequence Match ( AT5G24130.1 )
(BLAST)

001: MVKLATAREI RTYGPRLGRS RAEYINAGLY LFATVVLIGG FTATGFSWEP RSGLVLILLA LVLITAVNVH DLVAHLAGID YRLRLMEYDL QLGLVEFAVP
101: LVQIAGSVVF FLGIFFVFHQ AETKRGYSGR EHHALNLLIA GPLLWLIGSI HNSCQIYERA DSHVQILQQC VYIPFLVGSL LFLVSAVLNS LDISGSSRSG
201: LKLLGERWIW LGISGAICLF VGGLLNVVKV FNFVQISGLR LEKLRGGAQD RLLEGREGYL PLVAEEERIR KMEADHEASS RAKPRAHTTS KAGEGATETV
301: VVSSPTPYKD VLVGQI

Arabidopsis Description

At5g24130 [Source:UniProtKB/TrEMBL;Acc:Q9FL61]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.