Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G138100.1 | Wheat | plasma membrane | 96.87 | 97.17 |
| TraesCS3B01G155100.1 | Wheat | mitochondrion, plasma membrane | 96.24 | 96.54 |
| HORVU3Hr1G026120.1 | Barley | mitochondrion, plasma membrane | 93.42 | 95.51 |
| HORVU3Hr1G058570.1 | Barley | mitochondrion, plasma membrane | 93.42 | 95.51 |
| Zm00001d016098_P002 | Maize | mitochondrion, plasma membrane | 66.77 | 70.76 |
| Os02t0257200-01 | Rice | nucleus, plastid | 66.46 | 69.74 |
| OQU84732 | Sorghum | mitochondrion | 68.65 | 64.99 |
| VIT_16s0050g02650.t01 | Wine grape | mitochondrion, plasma membrane | 47.65 | 51.88 |
| GSMUA_Achr6P22890_001 | Banana | mitochondrion, plasma membrane | 45.14 | 51.06 |
| GSMUA_Achr10P... | Banana | mitochondrion | 41.38 | 50.38 |
| GSMUA_Achr5P06770_001 | Banana | mitochondrion | 46.4 | 49.17 |
| TraesCS1A01G426800.1 | Wheat | mitochondrion, plasma membrane | 41.69 | 48.9 |
| KRH53446 | Soybean | mitochondrion, plasma membrane | 42.63 | 45.95 |
| Solyc03g007340.2.1 | Tomato | mitochondrion, plasma membrane | 44.83 | 45.4 |
| AT5G24130.1 | Thale cress | plasma membrane | 44.2 | 44.62 |
| PGSC0003DMT400023438 | Potato | plasma membrane | 28.53 | 43.96 |
| CDX88079 | Canola | mitochondrion, plasma membrane | 43.26 | 43.81 |
| CDX80417 | Canola | plasma membrane | 43.26 | 43.81 |
| Bra009736.1-P | Field mustard | mitochondrion, plasma membrane | 43.26 | 43.81 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G137300.1 | EnsemblPlantsGene:TraesCS3A01G137300 | PANTHER:PTHR34967 | PANTHER:PTHR34967:SF1 | SEG:seg | TMHMM:TMhelix |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3A:-:114444122..114445413
Molecular Weight (calculated)
34141.7 Da
IEP (calculated)
9.810
GRAVY (calculated)
0.175
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKLATARDC RAYSLGATGG ETSRNRRWEY INAGVYVFAA VLLVAGFLAQ LWPWAVSTKA GLAVAVVGLL GVLGANAHDL LAHVAGVDYN LGLAGLDTQF
101: VLVELAAPAV QLAGAALTLV ALILFEIQME RGHRRGLERH GLNLLIAGPA LWCLGSIHNM CQVYERANGH VQILQKSVHI PFLLGSTLFF IGGVVNRNDV
201: HGRSSHSSTL LGRSWAWYCL FGSLLFLAGG LLNLLKVFKM QQMGGRGLEK LRGGAQERLS REREGKVPLI LEEGRMGKHG GNVGDTWAPG PAPRHEPRAP
301: PVPPPPEGSY KDAVVSGGN
101: VLVELAAPAV QLAGAALTLV ALILFEIQME RGHRRGLERH GLNLLIAGPA LWCLGSIHNM CQVYERANGH VQILQKSVHI PFLLGSTLFF IGGVVNRNDV
201: HGRSSHSSTL LGRSWAWYCL FGSLLFLAGG LLNLLKVFKM QQMGGRGLEK LRGGAQERLS REREGKVPLI LEEGRMGKHG GNVGDTWAPG PAPRHEPRAP
301: PVPPPPEGSY KDAVVSGGN
001: MVKLATAREI RTYGPRLGRS RAEYINAGLY LFATVVLIGG FTATGFSWEP RSGLVLILLA LVLITAVNVH DLVAHLAGID YRLRLMEYDL QLGLVEFAVP
101: LVQIAGSVVF FLGIFFVFHQ AETKRGYSGR EHHALNLLIA GPLLWLIGSI HNSCQIYERA DSHVQILQQC VYIPFLVGSL LFLVSAVLNS LDISGSSRSG
201: LKLLGERWIW LGISGAICLF VGGLLNVVKV FNFVQISGLR LEKLRGGAQD RLLEGREGYL PLVAEEERIR KMEADHEASS RAKPRAHTTS KAGEGATETV
301: VVSSPTPYKD VLVGQI
101: LVQIAGSVVF FLGIFFVFHQ AETKRGYSGR EHHALNLLIA GPLLWLIGSI HNSCQIYERA DSHVQILQQC VYIPFLVGSL LFLVSAVLNS LDISGSSRSG
201: LKLLGERWIW LGISGAICLF VGGLLNVVKV FNFVQISGLR LEKLRGGAQD RLLEGREGYL PLVAEEERIR KMEADHEASS RAKPRAHTTS KAGEGATETV
301: VVSSPTPYKD VLVGQI
Arabidopsis Description
At5g24130 [Source:UniProtKB/TrEMBL;Acc:Q9FL61]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.