CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016098_P002	Maize	mitochondrion, plasma membrane	78.34	87.71
HORVU3Hr1G026120.1	Barley	mitochondrion, plasma membrane	65.58	70.83
HORVU3Hr1G058570.1	Barley	mitochondrion, plasma membrane	65.58	70.83
TraesCS3B01G155100.1	Wheat	mitochondrion, plasma membrane	65.28	69.18
Os02t0257200-01	Rice	nucleus, plastid	62.31	69.08
TraesCS3D01G138100.1	Wheat	plasma membrane	64.99	68.87
TraesCS3A01G137300.1	Wheat	plasma membrane	64.99	68.65
GSMUA_Achr5P06770_001	Banana	mitochondrion	47.77	53.49
GSMUA_Achr10P...	Banana	mitochondrion	41.54	53.44
VIT_16s0050g02650.t01	Wine grape	mitochondrion, plasma membrane	44.21	50.85
GSMUA_Achr6P22890_001	Banana	mitochondrion, plasma membrane	40.65	48.58
KRH53446	Soybean	mitochondrion, plasma membrane	42.43	48.31
Solyc03g007340.2.1	Tomato	mitochondrion, plasma membrane	45.1	48.25
KXG22640	Sorghum	mitochondrion, plasma membrane	40.36	48.23
AT5G24130.1	Thale cress	plasma membrane	42.43	45.25
CDX88079	Canola	mitochondrion, plasma membrane	42.14	45.08
CDX80417	Canola	plasma membrane	42.14	45.08
Bra009736.1-P	Field mustard	mitochondrion, plasma membrane	42.14	45.08
PGSC0003DMT400023438	Potato	plasma membrane	25.22	41.06

Protein Annotations

EnsemblPlants:OQU84732	EnsemblPlantsGene:SORBI_3004G114600	EntrezGene:8059049	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR34967	PANTHER:PTHR34967:SF1	ProteinID:OQU84732	ProteinID:OQU84732.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI000B8BAD01	UniProt:A0A1Z5RLV3	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:11585696..11587272

Molecular Weight (calculated)

35729.2 Da

IEP (calculated)

10.719

GRAVY (calculated)

0.376

Length

337 amino acids

Sequence
(BLAST)

001: MLPRIRHARH LDPALAYGSL TMRLAMVKLA TARECRTYSL GAGAGSGTAS RNRWEYINAG VYILAAVLLV AGFLAQLPPW GRGWSGRPGL VVTAIGLAGV
101: LAVNAHDLLA HVAGVDYRLG TVAGLDAQLA LVELAVPAVQ IVGTLLMLVA VIFFEIQMER GYRHSLAVHG LNLLIAGPAL WCLGSVHNIC QVYERASGHV
201: QLLQKSVQIP LLLGSTLFLV AGVVNRHDRR SRHSAFVLLG RSWVWFCVFG SLLFLAGGVL NLLKVFKTQQ MGGRGLEKLR GGAQERLALE REGKVPLILE
301: HGHGGGGGGG RTRPGPAAGA MTPPPGSYKD ALVSSAS

Best Arabidopsis Sequence Match ( AT5G24130.1 )
(BLAST)

001: MVKLATAREI RTYGPRLGRS RAEYINAGLY LFATVVLIGG FTATGFSWEP RSGLVLILLA LVLITAVNVH DLVAHLAGID YRLRLMEYDL QLGLVEFAVP
101: LVQIAGSVVF FLGIFFVFHQ AETKRGYSGR EHHALNLLIA GPLLWLIGSI HNSCQIYERA DSHVQILQQC VYIPFLVGSL LFLVSAVLNS LDISGSSRSG
201: LKLLGERWIW LGISGAICLF VGGLLNVVKV FNFVQISGLR LEKLRGGAQD RLLEGREGYL PLVAEEERIR KMEADHEASS RAKPRAHTTS KAGEGATETV
301: VVSSPTPYKD VLVGQI

Arabidopsis Description

At5g24130 [Source:UniProtKB/TrEMBL;Acc:Q9FL61]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.