Factsheet for GSMUA_Achr6P22890_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

nucleus 1
golgi 2
plastid 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	cytosol, plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0050g02650.t01	Wine grape	mitochondrion, plasma membrane	59.22	57.0
GSMUA_Achr10P...	Banana	mitochondrion	50.35	54.2
GSMUA_Achr5P06770_001	Banana	mitochondrion	54.61	51.16
Zm00001d009718_P001	Maize	mitochondrion, plasma membrane	47.52	50.76
KRH53446	Soybean	mitochondrion, plasma membrane	51.77	49.32
KXG22640	Sorghum	mitochondrion, plasma membrane	49.29	49.29
Solyc03g007340.2.1	Tomato	mitochondrion, plasma membrane	54.26	48.57
CDX80417	Canola	plasma membrane	54.26	48.57
Bra009736.1-P	Field mustard	mitochondrion, plasma membrane	53.55	47.94
CDX88079	Canola	mitochondrion, plasma membrane	53.55	47.94
AT5G24130.1	Thale cress	plasma membrane	53.19	47.47
TraesCS1A01G426800.1	Wheat	mitochondrion, plasma membrane	45.04	46.69
HORVU3Hr1G058570.1	Barley	mitochondrion, plasma membrane	51.42	46.47
HORVU3Hr1G026120.1	Barley	mitochondrion, plasma membrane	51.42	46.47
TraesCS3B01G155100.1	Wheat	mitochondrion, plasma membrane	52.13	46.23
TraesCS3D01G138100.1	Wheat	plasma membrane	51.42	45.6
Os02t0257200-01	Rice	nucleus, plastid	48.94	45.39
TraesCS1B01G461700.1	Wheat	mitochondrion, plasma membrane	43.26	45.19
TraesCS3A01G137300.1	Wheat	plasma membrane	51.06	45.14
Os05t0586700-00	Rice	nucleus, plastid	48.94	45.1
Zm00001d016098_P002	Maize	mitochondrion, plasma membrane	47.52	44.52
HORVU5Hr1G032740.1	Barley	mitochondrion, plasma membrane	23.76	44.08
OQU84732	Sorghum	mitochondrion	48.58	40.65
PGSC0003DMT400023438	Potato	plasma membrane	28.72	39.13
HORVU6Hr1G076620.3	Barley	mitochondrion	34.04	36.36
TraesCS1D01G436600.1	Wheat	plastid	43.97	34.44
HORVU1Hr1G093170.2	Barley	cytosol, plastid	27.3	28.52

Protein Annotations

EnsemblPlants:GSMUA_Achr6P22890_001	EnsemblPlants:GSMUA_Achr6T22890_001	EnsemblPlantsGene:GSMUA_Achr6G22890_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR34967	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002955D97	UniProt:M0T9D7	MapMan:35.2

Description

Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G22890_001]

Coordinates

chr6:+:21596625..21597623

Molecular Weight (calculated)

31130.9 Da

IEP (calculated)

6.521

GRAVY (calculated)

0.210

Length

282 amino acids

Sequence
(BLAST)

001: MVKLASARES RLYGPHSVEN RWEYINAGLH VFAAALLTAG FSAELPGRSN DEVDLAVILV ALALLAVVNA HDLVAHMAGI DYQFGLFGYD LQLGLVELAV
101: PLLQMLGSIV TFTGILFLFI QEEKGFDYKM EKDAVNMLIA GPLLWVIGSI HNACQIYERA DGDTQILQSG VYVPFLMGSL LFFVAGIFNR QDLRGSTHQE
201: ARITAISWAW LSTFGGLLFL VGGLTNVAKV FKMQQRDGLR LEKLRGSAQE RLFRDREGRF PILENSRRRP GEEASTAAAP RG

Best Arabidopsis Sequence Match ( AT5G24130.1 )
(BLAST)

001: MVKLATAREI RTYGPRLGRS RAEYINAGLY LFATVVLIGG FTATGFSWEP RSGLVLILLA LVLITAVNVH DLVAHLAGID YRLRLMEYDL QLGLVEFAVP
101: LVQIAGSVVF FLGIFFVFHQ AETKRGYSGR EHHALNLLIA GPLLWLIGSI HNSCQIYERA DSHVQILQQC VYIPFLVGSL LFLVSAVLNS LDISGSSRSG
201: LKLLGERWIW LGISGAICLF VGGLLNVVKV FNFVQISGLR LEKLRGGAQD RLLEGREGYL PLVAEEERIR KMEADHEASS RAKPRAHTTS KAGEGATETV
301: VVSSPTPYKD VLVGQI

Arabidopsis Description

At5g24130 [Source:UniProtKB/TrEMBL;Acc:Q9FL61]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.