Factsheet for Zm00001d009718_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

mitochondrion 3
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG22640	Sorghum	mitochondrion, plasma membrane	83.33	78.01
TraesCS1A01G426800.1	Wheat	mitochondrion, plasma membrane	71.21	69.12
TraesCS1B01G461700.1	Wheat	mitochondrion, plasma membrane	70.45	68.89
Os05t0586700-00	Rice	nucleus, plastid	74.24	64.05
HORVU5Hr1G032740.1	Barley	mitochondrion, plasma membrane	33.71	58.55
HORVU6Hr1G076620.3	Barley	mitochondrion	51.52	51.52
TraesCS1D01G436600.1	Wheat	plastid	69.32	50.83
GSMUA_Achr6P22890_001	Banana	mitochondrion, plasma membrane	50.76	47.52
VIT_16s0050g02650.t01	Wine grape	mitochondrion, plasma membrane	48.86	44.03
Zm00001d016098_P002	Maize	mitochondrion, plasma membrane	48.11	42.19
GSMUA_Achr10P...	Banana	mitochondrion	41.29	41.6
CDX80417	Canola	plasma membrane	49.62	41.59
HORVU1Hr1G093170.2	Barley	cytosol, plastid	42.42	41.48
GSMUA_Achr5P06770_001	Banana	mitochondrion	46.97	41.2
Bra009736.1-P	Field mustard	mitochondrion, plasma membrane	48.86	40.95
CDX88079	Canola	mitochondrion, plasma membrane	48.86	40.95
Solyc03g007340.2.1	Tomato	mitochondrion, plasma membrane	47.35	39.68
AT5G24130.1	Thale cress	plasma membrane	47.35	39.56
KRH53446	Soybean	mitochondrion, plasma membrane	43.18	38.51
PGSC0003DMT400023438	Potato	plasma membrane	25.76	32.85

Protein Annotations

EMBL:BT033390	EMBL:EU951844	EnsemblPlants:Zm00001d009718_P001	EnsemblPlants:Zm00001d009718_T001	EnsemblPlantsGene:Zm00001d009718	EntrezGene:100191327
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR34967	PANTHER:PTHR34967:SF2	ProteinID:AQK92470.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI00017B6025	UniProt:B4F8F2	MapMan:35.2	:

Description

No Description!

Coordinates

chr8:-:77713138..77713932

Molecular Weight (calculated)

27925.3 Da

IEP (calculated)

9.870

GRAVY (calculated)

0.488

Length

264 amino acids

Sequence
(BLAST)

001: MVKLATAREA RLYGPALAAR RWEYINAGTY VFAALLLVLA AALSMSVSAA RLGLAVGAVA LAAVAAVNAH DLAAHLAGVD CRVGLARYDA QLGLVEFLVP
101: AVHAAGCALA AAGLALLASP HSHSQSQQRH AATMLLVAAL LWVLGSVLNS CQVYERADGR AQLLQSGVQV PQLLGSLLFL VAAALNRPRS GGEPAWLCLV
201: GSVLWLAAAL LNVLKVFAMH QSDALRLEKL RGGAQEWLSR DREGRVPLNW EEAARRRALP TELR

Best Arabidopsis Sequence Match ( AT5G24130.1 )
(BLAST)

001: MVKLATAREI RTYGPRLGRS RAEYINAGLY LFATVVLIGG FTATGFSWEP RSGLVLILLA LVLITAVNVH DLVAHLAGID YRLRLMEYDL QLGLVEFAVP
101: LVQIAGSVVF FLGIFFVFHQ AETKRGYSGR EHHALNLLIA GPLLWLIGSI HNSCQIYERA DSHVQILQQC VYIPFLVGSL LFLVSAVLNS LDISGSSRSG
201: LKLLGERWIW LGISGAICLF VGGLLNVVKV FNFVQISGLR LEKLRGGAQD RLLEGREGYL PLVAEEERIR KMEADHEASS RAKPRAHTTS KAGEGATETV
301: VVSSPTPYKD VLVGQI

Arabidopsis Description

At5g24130 [Source:UniProtKB/TrEMBL;Acc:Q9FL61]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.