Factsheet for Os05t0586700-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 1
mitochondrion 3
golgi 2
nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

nucleus: 26035336
plastid: 27992503

msms PMID: 26035336 doi

M Li, X Yin, K Sakata, P Yang, S Komatsu

§Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan., †Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China., ‡National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d009718_P001	Maize	mitochondrion, plasma membrane	64.05	74.24
TraesCS1A01G426800.1	Wheat	mitochondrion, plasma membrane	62.75	70.59
KXG22640	Sorghum	mitochondrion, plasma membrane	64.71	70.21
TraesCS1B01G461700.1	Wheat	mitochondrion, plasma membrane	61.76	70.0
HORVU5Hr1G032740.1	Barley	mitochondrion, plasma membrane	30.39	61.18
HORVU6Hr1G076620.3	Barley	mitochondrion	45.1	52.27
TraesCS1D01G436600.1	Wheat	plastid	60.46	51.39
GSMUA_Achr6P22890_001	Banana	mitochondrion, plasma membrane	45.1	48.94
Os02t0257200-01	Rice	nucleus, plastid	47.39	47.7
GSMUA_Achr5P06770_001	Banana	mitochondrion	44.44	45.18
GSMUA_Achr10P...	Banana	mitochondrion	37.91	44.27
VIT_16s0050g02650.t01	Wine grape	mitochondrion, plasma membrane	41.5	43.34
CDX80417	Canola	plasma membrane	42.48	41.27
HORVU1Hr1G093170.2	Barley	cytosol, plastid	36.27	41.11
Bra009736.1-P	Field mustard	mitochondrion, plasma membrane	41.83	40.63
Solyc03g007340.2.1	Tomato	mitochondrion, plasma membrane	41.83	40.63
CDX88079	Canola	mitochondrion, plasma membrane	41.83	40.63
AT5G24130.1	Thale cress	plasma membrane	41.83	40.51
KRH53446	Soybean	mitochondrion, plasma membrane	37.25	38.51
PGSC0003DMT400023438	Potato	plasma membrane	22.88	33.82

Protein Annotations

EnsemblPlants:Os05t0586700-00	EnsemblPlantsGene:Os05g0586700	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR34967
PANTHER:PTHR34967:SF2	ProteinID:BAF18378.1	ProteinID:BAS95580.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0000E12613
UniProt:Q0DFJ5	MapMan:35.2	:	:	:	:

Description

Conserved hypothetical protein. (Os05t0586700-00)

Coordinates

chr5:+:29228254..29229250

Molecular Weight (calculated)

32323.9 Da

IEP (calculated)

10.477

GRAVY (calculated)

0.467

Length

306 amino acids

Sequence
(BLAST)

001: MVKLATAREA RMYGPALAVR RWEYINAGAY VFAALLLAVA LAALSAGGGG GGGASRAALA VAAVALALVA AVNAHDLAAH LAGVDCRVGL VRYDAQLGLV
101: ELLVPALHVA GCVLAVVAMA FLLSQGERET HAANTLLAAA LVWLLGSILN SCQVYERADG RAQLLQSSVQ VPMLLGSLLF LVGAVVNRRR RPEPPVLVVS
201: ARSIRSSNLA AGVGMHDAMT KPCGLTVTQG RSWAWTMCVL GSVLWLVAAV FNMGKVFVMH QSDAPRLEKL RGGAQERLSR DREGRLPLNW EEAARSRRVA
301: LPAELR

Best Arabidopsis Sequence Match ( AT5G24130.1 )
(BLAST)

001: MVKLATAREI RTYGPRLGRS RAEYINAGLY LFATVVLIGG FTATGFSWEP RSGLVLILLA LVLITAVNVH DLVAHLAGID YRLRLMEYDL QLGLVEFAVP
101: LVQIAGSVVF FLGIFFVFHQ AETKRGYSGR EHHALNLLIA GPLLWLIGSI HNSCQIYERA DSHVQILQQC VYIPFLVGSL LFLVSAVLNS LDISGSSRSG
201: LKLLGERWIW LGISGAICLF VGGLLNVVKV FNFVQISGLR LEKLRGGAQD RLLEGREGYL PLVAEEERIR KMEADHEASS RAKPRAHTTS KAGEGATETV
301: VVSSPTPYKD VLVGQI

Arabidopsis Description

At5g24130 [Source:UniProtKB/TrEMBL;Acc:Q9FL61]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.