Factsheet for Os02t0257200-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 2
mitochondrion 4
golgi 3
peroxisome 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	golgi, mitochondrion, peroxisome, plasma membrane, plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

nucleus: 26035336
plastid: 27992503

msms PMID: 26035336 doi

M Li, X Yin, K Sakata, P Yang, S Komatsu

§Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan., †Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China., ‡National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016098_P002	Maize	mitochondrion, plasma membrane	68.75	69.44
HORVU3Hr1G026120.1	Barley	mitochondrion, plasma membrane	70.72	68.91
HORVU3Hr1G058570.1	Barley	mitochondrion, plasma membrane	70.72	68.91
TraesCS3B01G155100.1	Wheat	mitochondrion, plasma membrane	70.72	67.61
TraesCS3D01G138100.1	Wheat	plasma membrane	70.39	67.3
TraesCS3A01G137300.1	Wheat	plasma membrane	69.74	66.46
OQU84732	Sorghum	mitochondrion	69.08	62.31
GSMUA_Achr10P...	Banana	mitochondrion	48.36	56.11
VIT_16s0050g02650.t01	Wine grape	mitochondrion, plasma membrane	50.66	52.56
GSMUA_Achr5P06770_001	Banana	mitochondrion	51.97	52.49
GSMUA_Achr6P22890_001	Banana	mitochondrion, plasma membrane	45.39	48.94
Solyc03g007340.2.1	Tomato	mitochondrion, plasma membrane	50.0	48.25
Os05t0586700-00	Rice	nucleus, plastid	47.7	47.39
KRH53446	Soybean	mitochondrion, plasma membrane	45.72	46.96
AT5G24130.1	Thale cress	plasma membrane	48.36	46.52
CDX88079	Canola	mitochondrion, plasma membrane	48.03	46.35
Bra009736.1-P	Field mustard	mitochondrion, plasma membrane	48.03	46.35
CDX80417	Canola	plasma membrane	47.7	46.03
PGSC0003DMT400023438	Potato	plasma membrane	28.95	42.51

Protein Annotations

EMBL:AK103494	EnsemblPlants:Os02t0257200-01	EnsemblPlantsGene:Os02g0257200	EntrezGene:4328924	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	PANTHER:PTHR34967	PANTHER:PTHR34967:SF1	ProteinID:BAD27962.1	ProteinID:BAF08386.1	ProteinID:BAS77961.1
RefSeq:XP_015624128.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI00003CE57F	UniProt:Q6ETQ8	MapMan:35.2

Description

Conserved hypothetical protein. (Os02t0257200-01)

Coordinates

chr2:-:8869192..8871520

Molecular Weight (calculated)

32337.6 Da

IEP (calculated)

9.826

GRAVY (calculated)

0.295

Length

304 amino acids

Sequence
(BLAST)

001: MVKLATAREC RAYGLGGGGR AARGRWEYIN AGAYVFAAVL LAGGFGWHLS AWSATTRSGL AAAALGLLLL LAVNAHDLLA HAAGVDYSLA LAAGLDSQFA
101: LVEVAVPAVH FAGTVLTLIA LIFFEIQMAR GYRHSLEKHG LNMLIAGPAL WLLGSIQNIC QVYERANGHV QILQKCVQTP LLLGSTLFLI GGIINRHDIH
201: SQSTSRSELL GRSWGWFCVS GSLLFVAAGL LNLLKVFKMQ QMDGRGLEKL RGGAQERLNR EREGKVPLIL EEGQRRTPAP VSGQVPPPPA GSYKEAVVSG
301: APAG

Best Arabidopsis Sequence Match ( AT5G24130.1 )
(BLAST)

001: MVKLATAREI RTYGPRLGRS RAEYINAGLY LFATVVLIGG FTATGFSWEP RSGLVLILLA LVLITAVNVH DLVAHLAGID YRLRLMEYDL QLGLVEFAVP
101: LVQIAGSVVF FLGIFFVFHQ AETKRGYSGR EHHALNLLIA GPLLWLIGSI HNSCQIYERA DSHVQILQQC VYIPFLVGSL LFLVSAVLNS LDISGSSRSG
201: LKLLGERWIW LGISGAICLF VGGLLNVVKV FNFVQISGLR LEKLRGGAQD RLLEGREGYL PLVAEEERIR KMEADHEASS RAKPRAHTTS KAGEGATETV
301: VVSSPTPYKD VLVGQI

Arabidopsis Description

At5g24130 [Source:UniProtKB/TrEMBL;Acc:Q9FL61]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.