Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- vacuole 2
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 2
- golgi 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P06770_001 | Banana | mitochondrion | 64.5 | 56.15 |
| VIT_16s0050g02650.t01 | Wine grape | mitochondrion, plasma membrane | 56.49 | 50.51 |
| GSMUA_Achr6P22890_001 | Banana | mitochondrion, plasma membrane | 54.2 | 50.35 |
| Os02t0257200-01 | Rice | nucleus, plastid | 56.11 | 48.36 |
| KRH53446 | Soybean | mitochondrion, plasma membrane | 51.53 | 45.61 |
| Zm00001d016098_P002 | Maize | mitochondrion, plasma membrane | 51.53 | 44.85 |
| CDX80417 | Canola | plasma membrane | 52.67 | 43.81 |
| Solyc03g007340.2.1 | Tomato | mitochondrion, plasma membrane | 52.67 | 43.81 |
| Bra009736.1-P | Field mustard | mitochondrion, plasma membrane | 51.91 | 43.17 |
| CDX88079 | Canola | mitochondrion, plasma membrane | 51.91 | 43.17 |
| AT5G24130.1 | Thale cress | plasma membrane | 51.15 | 42.41 |
| HORVU3Hr1G058570.1 | Barley | mitochondrion, plasma membrane | 50.38 | 42.31 |
| HORVU3Hr1G026120.1 | Barley | mitochondrion, plasma membrane | 50.38 | 42.31 |
| TraesCS3D01G138100.1 | Wheat | plasma membrane | 50.76 | 41.82 |
| OQU84732 | Sorghum | mitochondrion | 53.44 | 41.54 |
| TraesCS3A01G137300.1 | Wheat | plasma membrane | 50.38 | 41.38 |
| Zm00001d009718_P001 | Maize | mitochondrion, plasma membrane | 41.6 | 41.29 |
| TraesCS3B01G155100.1 | Wheat | mitochondrion, plasma membrane | 50.0 | 41.2 |
| KXG22640 | Sorghum | mitochondrion, plasma membrane | 44.27 | 41.13 |
| TraesCS1A01G426800.1 | Wheat | mitochondrion, plasma membrane | 40.46 | 38.97 |
| TraesCS1B01G461700.1 | Wheat | mitochondrion, plasma membrane | 40.08 | 38.89 |
| PGSC0003DMT400023438 | Potato | plasma membrane | 30.15 | 38.16 |
| Os05t0586700-00 | Rice | nucleus, plastid | 44.27 | 37.91 |
| HORVU6Hr1G076620.3 | Barley | mitochondrion | 34.35 | 34.09 |
| HORVU5Hr1G032740.1 | Barley | mitochondrion, plasma membrane | 19.08 | 32.89 |
| TraesCS1D01G436600.1 | Wheat | plastid | 40.08 | 29.17 |
| HORVU1Hr1G093170.2 | Barley | cytosol, plastid | 29.01 | 28.15 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P01050_001 | EnsemblPlants:GSMUA_Achr10T01050_001 | EnsemblPlantsGene:GSMUA_Achr10G01050_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR34967 | PANTHER:PTHR34967:SF1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000295FE4D | UniProt:M0RED2 |
| MapMan:35.2 | : | : | : | : | : |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G01050_001]
Coordinates
chr10:-:1753783..1754863
Molecular Weight (calculated)
28820.8 Da
IEP (calculated)
10.233
GRAVY (calculated)
0.383
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKLTTARES RTYGHLAARD RLEYINAGLY VLAPVLLVGG FTAQLSAAPA FAKSGLALAL IGLALVLFDV QLALVEFSVP LAHIVGTILN FIGILFFLIQ
101: MEKRYSPRLE SHAVNTLISG PIFWVIGSIH NICQVYETAN GHVQILQKCV QVPLLMGSLL FLVAGILNNH DTFGSIHTTS KIMGKSWVWL CLSGSCLFFV
201: GGLLNVVKVS KMQRRDGVRL EKLRGSAHES SARRREGQLP LILESSRRKK AEEVTPHYKA MP
101: MEKRYSPRLE SHAVNTLISG PIFWVIGSIH NICQVYETAN GHVQILQKCV QVPLLMGSLL FLVAGILNNH DTFGSIHTTS KIMGKSWVWL CLSGSCLFFV
201: GGLLNVVKVS KMQRRDGVRL EKLRGSAHES SARRREGQLP LILESSRRKK AEEVTPHYKA MP
001: MVKLATAREI RTYGPRLGRS RAEYINAGLY LFATVVLIGG FTATGFSWEP RSGLVLILLA LVLITAVNVH DLVAHLAGID YRLRLMEYDL QLGLVEFAVP
101: LVQIAGSVVF FLGIFFVFHQ AETKRGYSGR EHHALNLLIA GPLLWLIGSI HNSCQIYERA DSHVQILQQC VYIPFLVGSL LFLVSAVLNS LDISGSSRSG
201: LKLLGERWIW LGISGAICLF VGGLLNVVKV FNFVQISGLR LEKLRGGAQD RLLEGREGYL PLVAEEERIR KMEADHEASS RAKPRAHTTS KAGEGATETV
301: VVSSPTPYKD VLVGQI
101: LVQIAGSVVF FLGIFFVFHQ AETKRGYSGR EHHALNLLIA GPLLWLIGSI HNSCQIYERA DSHVQILQQC VYIPFLVGSL LFLVSAVLNS LDISGSSRSG
201: LKLLGERWIW LGISGAICLF VGGLLNVVKV FNFVQISGLR LEKLRGGAQD RLLEGREGYL PLVAEEERIR KMEADHEASS RAKPRAHTTS KAGEGATETV
301: VVSSPTPYKD VLVGQI
Arabidopsis Description
At5g24130 [Source:UniProtKB/TrEMBL;Acc:Q9FL61]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.