Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G076620.3 | Barley | mitochondrion | 71.48 | 73.11 |
| TraesCS1A01G426800.1 | Wheat | mitochondrion, plasma membrane | 54.07 | 53.68 |
| TraesCS1B01G461700.1 | Wheat | mitochondrion, plasma membrane | 52.59 | 52.59 |
| Zm00001d009718_P001 | Maize | mitochondrion, plasma membrane | 41.48 | 42.42 |
| KXG22640 | Sorghum | mitochondrion, plasma membrane | 41.48 | 39.72 |
| TraesCS1D01G436600.1 | Wheat | plastid | 51.85 | 38.89 |
| Os05t0586700-00 | Rice | nucleus, plastid | 41.11 | 36.27 |
| PGSC0003DMT400023438 | Potato | plasma membrane | 24.44 | 31.88 |
| GSMUA_Achr10P... | Banana | mitochondrion | 28.15 | 29.01 |
| VIT_16s0050g02650.t01 | Wine grape | mitochondrion, plasma membrane | 30.37 | 27.99 |
| GSMUA_Achr6P22890_001 | Banana | mitochondrion, plasma membrane | 28.52 | 27.3 |
| HORVU3Hr1G026120.1 | Barley | mitochondrion, plasma membrane | 31.48 | 27.24 |
| HORVU3Hr1G058570.1 | Barley | mitochondrion, plasma membrane | 31.48 | 27.24 |
| HORVU5Hr1G032740.1 | Barley | mitochondrion, plasma membrane | 15.19 | 26.97 |
| Solyc03g007340.2.1 | Tomato | mitochondrion, plasma membrane | 30.0 | 25.71 |
| GSMUA_Achr5P06770_001 | Banana | mitochondrion | 28.52 | 25.58 |
| KRH53446 | Soybean | mitochondrion, plasma membrane | 27.41 | 25.0 |
| CDX80417 | Canola | plasma membrane | 27.41 | 23.49 |
| Bra009736.1-P | Field mustard | mitochondrion, plasma membrane | 27.04 | 23.17 |
| CDX88079 | Canola | mitochondrion, plasma membrane | 27.04 | 23.17 |
| AT5G24130.1 | Thale cress | plasma membrane | 27.04 | 23.1 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G093170.2 | EnsemblPlantsGene:HORVU1Hr1G093170 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR34967 |
| PANTHER:PTHR34967:SF2 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000B483AE5 | UniProt:A0A287GS84 | MapMan:35.2 |
Description
No Description!
Coordinates
chrchr1H:-:552446968..552447868
Molecular Weight (calculated)
29351.8 Da
IEP (calculated)
12.453
GRAVY (calculated)
-0.487
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: GEARDGEGGA AVRAGAGGAP VGVHQRRRVH VRDPAPGRGA RGAVRVRGRR RRQGRGXAGR GGGRERARPG GSPRRRGLPL GPRPVRPPAR PRRAPRARAP
101: RRRLRPRHRR PRAAALLPDC CFYVLMAEQG DRLERRAADA LLAGAVLWIL GSVLSSCQTY ERADGRAQLL QSSVQVPVLL GSLLFLVAAV LHRRGEPTLP
201: GESERWISLC GSVLWVAGAL FNVLKVFVMH QSDAPRLEKL RGGAQERLAR DREGRVPLVW RSAAPPTELR
101: RRRLRPRHRR PRAAALLPDC CFYVLMAEQG DRLERRAADA LLAGAVLWIL GSVLSSCQTY ERADGRAQLL QSSVQVPVLL GSLLFLVAAV LHRRGEPTLP
201: GESERWISLC GSVLWVAGAL FNVLKVFVMH QSDAPRLEKL RGGAQERLAR DREGRVPLVW RSAAPPTELR
001: MVKLATAREI RTYGPRLGRS RAEYINAGLY LFATVVLIGG FTATGFSWEP RSGLVLILLA LVLITAVNVH DLVAHLAGID YRLRLMEYDL QLGLVEFAVP
101: LVQIAGSVVF FLGIFFVFHQ AETKRGYSGR EHHALNLLIA GPLLWLIGSI HNSCQIYERA DSHVQILQQC VYIPFLVGSL LFLVSAVLNS LDISGSSRSG
201: LKLLGERWIW LGISGAICLF VGGLLNVVKV FNFVQISGLR LEKLRGGAQD RLLEGREGYL PLVAEEERIR KMEADHEASS RAKPRAHTTS KAGEGATETV
301: VVSSPTPYKD VLVGQI
101: LVQIAGSVVF FLGIFFVFHQ AETKRGYSGR EHHALNLLIA GPLLWLIGSI HNSCQIYERA DSHVQILQQC VYIPFLVGSL LFLVSAVLNS LDISGSSRSG
201: LKLLGERWIW LGISGAICLF VGGLLNVVKV FNFVQISGLR LEKLRGGAQD RLLEGREGYL PLVAEEERIR KMEADHEASS RAKPRAHTTS KAGEGATETV
301: VVSSPTPYKD VLVGQI
Arabidopsis Description
At5g24130 [Source:UniProtKB/TrEMBL;Acc:Q9FL61]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.