Factsheet for HORVU3Hr1G026120.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

plastid 1
golgi 2
mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
MultiLoc:	golgi
Plant-mPloc:	mitochondrion
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G058570.1	Barley	mitochondrion, plasma membrane	100.0	100.0
TraesCS3D01G138100.1	Wheat	plasma membrane	96.15	94.34
TraesCS3B01G155100.1	Wheat	mitochondrion, plasma membrane	96.15	94.34
TraesCS3A01G137300.1	Wheat	plasma membrane	95.51	93.42
Zm00001d016098_P002	Maize	mitochondrion, plasma membrane	68.91	71.43
Os02t0257200-01	Rice	nucleus, plastid	68.91	70.72
OQU84732	Sorghum	mitochondrion	70.83	65.58
VIT_16s0050g02650.t01	Wine grape	mitochondrion, plasma membrane	49.04	52.22
GSMUA_Achr6P22890_001	Banana	mitochondrion, plasma membrane	46.47	51.42
GSMUA_Achr5P06770_001	Banana	mitochondrion	49.04	50.83
GSMUA_Achr10P...	Banana	mitochondrion	42.31	50.38
KRH53446	Soybean	mitochondrion, plasma membrane	44.55	46.96
HORVU5Hr1G032740.1	Barley	mitochondrion, plasma membrane	22.76	46.71
Solyc03g007340.2.1	Tomato	mitochondrion, plasma membrane	46.79	46.35
AT5G24130.1	Thale cress	plasma membrane	46.15	45.57
Bra009736.1-P	Field mustard	mitochondrion, plasma membrane	45.83	45.4
CDX88079	Canola	mitochondrion, plasma membrane	45.83	45.4
CDX80417	Canola	plasma membrane	45.51	45.08
PGSC0003DMT400023438	Potato	plasma membrane	29.81	44.93
HORVU6Hr1G076620.3	Barley	mitochondrion	31.73	37.5
HORVU1Hr1G093170.2	Barley	cytosol, plastid	27.24	31.48

Protein Annotations

EMBL:AK354743	EnsemblPlants:HORVU3Hr1G026120.1	EnsemblPlantsGene:HORVU3Hr1G026120	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR34967	PANTHER:PTHR34967:SF1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002004ED3	UniProt:F2CSZ1
MapMan:35.2	:	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CSZ1]

Coordinates

chrchr3H:-:104449148..104450503

Molecular Weight (calculated)

33462.0 Da

IEP (calculated)

10.187

GRAVY (calculated)

0.192

Length

312 amino acids

Sequence
(BLAST)

001: MVKLATARDC RAYSLGAAGG ETSRNRRWEY INAGVYVFAA VLLVVGFLAQ LWPWAVSTKA GLAVAVVGLL GVLAVNAHDL LAHVAGVDYN LGLAGLDTQF
101: VLVELAAPAV QLAGAALTLV ALILFEIQME RGRRRGLEKH GLNLLIAGPA LWCLGSIHNM CQVYERANGH VQILQKSVHI PFLLGSTLFF IGGVVNRNDV
201: HGHSSHSSAL LGRSWAWYCL FGSLLFLAGG LLNLLKVFKK QQMGGRGLEK LRGGAQERLN REREGKVPLI LEEGRRGKHG GNVGAPRHEP RAPPVPPPPE
301: GSYKDALVSG GN

Best Arabidopsis Sequence Match ( AT5G24130.1 )
(BLAST)

001: MVKLATAREI RTYGPRLGRS RAEYINAGLY LFATVVLIGG FTATGFSWEP RSGLVLILLA LVLITAVNVH DLVAHLAGID YRLRLMEYDL QLGLVEFAVP
101: LVQIAGSVVF FLGIFFVFHQ AETKRGYSGR EHHALNLLIA GPLLWLIGSI HNSCQIYERA DSHVQILQQC VYIPFLVGSL LFLVSAVLNS LDISGSSRSG
201: LKLLGERWIW LGISGAICLF VGGLLNVVKV FNFVQISGLR LEKLRGGAQD RLLEGREGYL PLVAEEERIR KMEADHEASS RAKPRAHTTS KAGEGATETV
301: VVSSPTPYKD VLVGQI

Arabidopsis Description

At5g24130 [Source:UniProtKB/TrEMBL;Acc:Q9FL61]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.