Factsheet for Zm00001d015006_P004

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d008871_P001
Zm00001d010783_P001
Zm00001d017390_P001
Zm00001d025939_P003
Zm00001d036342_P001
Zm00001d038803_P001
Zm00001d049553_P001
Zm00001d051288_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G03120.1	Zm00001d008871_P001	AT3G16310.1	21798944
AT2G03120.1	Zm00001d010783_P001	AT3G16310.1	21798944
AT2G03120.1	Zm00001d038803_P001	AT3G16310.1	21798944
AT2G03120.1	Zm00001d017390_P001	AT3G60600.1	21798944
AT2G03120.1	Zm00001d025939_P003	AT3G60600.1	21798944
AT2G03120.1	Zm00001d036342_P001	AT3G60600.1	21798944
AT2G03120.1	Zm00001d049553_P001	AT3G60600.1	21798944
AT2G03120.1	Zm00001d051288_P001	AT3G60600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04366	Sorghum	golgi, plasma membrane	94.81	95.64
KXG37644	Sorghum	plasma membrane	93.66	92.07
Os05t0436400-03	Rice	plasma membrane	72.05	87.41
Os02t0117400-01	Rice	plasma membrane	86.17	87.17
TraesCS3D01G492200.1	Wheat	plasma membrane	83.86	84.59
TraesCS3B01G545500.1	Wheat	plasma membrane	83.57	84.3
TraesCSU01G107100.2	Wheat	plasma membrane	83.0	84.21
TraesCS6B01G064600.2	Wheat	plasma membrane	82.71	84.16
TraesCS6B01G064500.2	Wheat	plasma membrane	82.71	84.16
TraesCS6A01G048100.2	Wheat	plasma membrane	81.84	83.04
HORVU6Hr1G009670.1	Barley	plasma membrane	81.56	82.75
CDX88296	Canola	plasma membrane	70.03	82.09
GSMUA_Achr5P08750_001	Banana	plasma membrane	81.27	81.74
PGSC0003DMT400024446	Potato	plasma membrane	78.1	80.65
CDY03017	Canola	plasma membrane	77.81	80.6
PGSC0003DMT400058489	Potato	plasma membrane	78.39	80.47
HORVU3Hr1G108010.6	Barley	plasma membrane	80.12	80.35
CDY45179	Canola	plasma membrane	77.52	80.3
Bra024788.1-P	Field mustard	plasma membrane	77.52	80.3
KRH16232	Soybean	plasma membrane	78.67	80.06
KRH52673	Soybean	plasma membrane	78.67	80.06
KRH62014	Soybean	endoplasmic reticulum	78.67	80.06
Solyc11g064790.1.1	Tomato	plasma membrane	78.1	79.94
Solyc01g008820.2.1	Tomato	plasma membrane	77.81	79.88
VIT_06s0009g03520.t01	Wine grape	plasma membrane	78.39	79.77
CDY60831	Canola	plasma membrane	76.95	79.46
AT2G03120.1	Thale cress	plasma membrane	78.67	79.36
CDY17419	Canola	plasma membrane	76.66	79.17
CDY09342	Canola	plasma membrane	77.52	78.43
Bra026567.1-P	Field mustard	plasma membrane	77.52	78.43
CDY64408	Canola	plasma membrane	77.52	78.43
Bra017402.1-P	Field mustard	golgi, plasma membrane	34.01	75.16
GSMUA_Achr1P24450_001	Banana	plasma membrane	64.84	74.01
Zm00001d015005_P002	Maize	plasma membrane	47.84	69.75
CDY03016	Canola	extracellular, golgi, plasma membrane	25.65	67.94
Zm00001d054017_P003	Maize	plasma membrane	92.8	59.3
Zm00001d049930_P003	Maize	endoplasmic reticulum, plasma membrane, vacuole	30.55	28.57
Zm00001d031933_P003	Maize	endoplasmic reticulum, plasma membrane, vacuole	30.26	28.23
Zm00001d014901_P001	Maize	plasma membrane	25.07	16.23
Zm00001d051873_P002	Maize	plasma membrane	24.78	15.69
Zm00001d042378_P001	Maize	plasma membrane	21.04	14.2
Zm00001d004702_P006	Maize	plasma membrane	22.48	10.21

Protein Annotations

EntrezGene:100217073	MapMan:18.10.1.4	UniProt:A0A1D6GYP1	ProteinID:AQK67875.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004190	GO:GO:0005575	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	PFAM:PF04258	PFscan:PS51257	PANTHER:PTHR12174
PANTHER:PTHR12174:SF23	InterPro:Peptidase_A22B_SPP	InterPro:Preselin/SPP	SMART:SM00730	SignalP:SignalP-TM	TMHMM:TMhelix
UniParc:UPI000220F163	EnsemblPlantsGene:Zm00001d015006	EnsemblPlants:Zm00001d015006_P004	EnsemblPlants:Zm00001d015006_T004	SEG:seg	:

Description

Signal peptide peptidase

Coordinates

chr5:+:72018095..72023626

Molecular Weight (calculated)

38422.3 Da

IEP (calculated)

7.799

GRAVY (calculated)

0.515

Length

347 amino acids

Sequence
(BLAST)

001: MRAHERAASL ALACLSLAPL LVNVNPNVNV VLTACLTVYV GCYRSVKPTP PSETMSKEHA MRFPLVGSAM LLSLFLLFKF LSKDLVNAVL TAYFFILGIV
101: ALSATLLPSI KRFLPKEWND NLIVWRAPFF HSLSVEFTKS QIIASIPGFF FCLWYASKKH WLANNVLGLA FCIQGIEMLS LGSFKTGAIL LGGLFVYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTADAER PFSMLGLGDI VIPGIFVALA LRFDVSRGTK KRYFNSAFLG YAVGMTVTIV VMNWFQAAQP ALLYLVPGVI
301: GFVAVPCLWY GEVKQLLEFD ESKTESEEGS TEEEQDDDSS KGNKKVE

Best Arabidopsis Sequence Match ( AT2G03120.1 )
(BLAST)

001: MKNCERFANL ALAGLTLAPL VVRVNPNLNV ILTACITVYV GCFRSVKDTP PTETMSKEHA MRFPLVGSAM LLSLFLLFKF LSKDLVNAVL TAYFFVLGIV
101: ALSATLLPAI RRFLPNPWND NLIVWRFPYF KSLEVEFTKS QVVAGIPGTF FCAWYAWKKH WLANNILGLS FCIQGIEMLS LGSFKTGAIL LAGLFFYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTGDALR PYSMLGLGDI VIPGIFVALA LRFDVSRRRQ PQYFTSAFIG YAVGVILTIV VMNWFQAAQP ALLYIVPAVI
301: GFLASHCIWN GDIKPLLAFD ESKTEEATTD ESKTSEEVNK AHDE

Arabidopsis Description

SPPSignal peptide peptidase [Source:UniProtKB/Swiss-Prot;Acc:O81062]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.