Factsheet for Os05t0436400-03

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
YLoc:	plasma membrane

endoplasmic reticulum: 19688213

plasma membrane: 27800704

gfp PMID: 19688213 doi

T Tamura, M Kuroda, T Oikawa, J Kyozuka, K Terauchi, Y Ishimaru, K Abe, T Asakura

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0200500-01
Os02t0643000-01
Os04t0534400-01
Os05t0520100-00
Os08t0156700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G03120.1	Os01t0200500-01	AT3G16310.1	21798944
AT2G03120.1	Os05t0520100-00	AT3G16310.1	21798944
AT2G03120.1	Os02t0643000-01	AT3G60600.1	21798944
AT2G03120.1	Os04t0534400-01	AT3G60600.1	21798944
AT2G03120.1	Os08t0156700-01	AT3G60600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0117400-01	Rice	plasma membrane	97.2	81.05
GSMUA_Achr1P24450_001	Banana	plasma membrane	79.37	74.67
TraesCS3B01G545500.1	Wheat	plasma membrane	88.81	73.84
EES04366	Sorghum	golgi, plasma membrane	88.46	73.55
TraesCS3D01G492200.1	Wheat	plasma membrane	88.46	73.55
TraesCSU01G107100.2	Wheat	plasma membrane	86.36	72.22
TraesCS6B01G064600.2	Wheat	plasma membrane	86.01	72.14
TraesCS6B01G064500.2	Wheat	plasma membrane	86.01	72.14
Zm00001d015006_P004	Maize	plasma membrane	87.41	72.05
TraesCS6A01G048100.2	Wheat	plasma membrane	86.01	71.93
HORVU6Hr1G009670.1	Barley	plasma membrane	86.01	71.93
KXG37644	Sorghum	plasma membrane	86.36	69.97
HORVU3Hr1G108010.6	Barley	plasma membrane	83.57	69.08
GSMUA_Achr5P08750_001	Banana	plasma membrane	83.22	68.99
CDY03016	Canola	extracellular, golgi, plasma membrane	31.47	68.7
PGSC0003DMT400024446	Potato	plasma membrane	79.37	67.56
CDY03017	Canola	plasma membrane	79.02	67.46
CDY60831	Canola	plasma membrane	79.02	67.26
Bra024788.1-P	Field mustard	plasma membrane	78.67	67.16
CDY45179	Canola	plasma membrane	78.67	67.16
CDY17419	Canola	plasma membrane	78.67	66.96
Solyc11g064790.1.1	Tomato	plasma membrane	79.37	66.96
CDX88296	Canola	plasma membrane	69.23	66.89
KRH52673	Soybean	plasma membrane	79.37	66.57
KRH62014	Soybean	endoplasmic reticulum	79.37	66.57
AT2G03120.1	Thale cress	plasma membrane	79.72	66.28
VIT_06s0009g03520.t01	Wine grape	plasma membrane	79.02	66.28
KRH16232	Soybean	plasma membrane	79.02	66.28
CDY64408	Canola	plasma membrane	78.67	65.6
CDY09342	Canola	plasma membrane	78.67	65.6
Bra026567.1-P	Field mustard	plasma membrane	78.67	65.6
PGSC0003DMT400058489	Potato	plasma membrane	77.27	65.38
Solyc01g008820.2.1	Tomato	plasma membrane	76.92	65.09
Zm00001d015005_P002	Maize	plasma membrane	43.71	52.52
Bra017402.1-P	Field mustard	golgi, plasma membrane	28.67	52.23
Zm00001d054017_P003	Maize	plasma membrane	87.76	46.22
OQU87114	Sorghum	plasma membrane	52.8	41.94
Os10t0393100-01	Rice	plasma membrane	33.92	26.15
Os11t0433200-02	Rice	cytosol, plasma membrane	28.32	17.8
Os06t0730900-01	Rice	plasma membrane	27.97	14.76
Os02t0823000-01	Rice	plasma membrane	26.22	13.76
Os01t0914700-01	Rice	plasma membrane	24.48	13.38
Os02t0823100-01	Rice	plasma membrane	4.55	4.51

Protein Annotations

MapMan:18.10.1.4	UniProt:A0A0P0WMV4	ProteinID:BAS94202.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0004190	GO:GO:0005575	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:Os05g0436400	EnsemblPlants:Os05t0436400-03	PFAM:PF04258
PANTHER:PTHR12174	PANTHER:PTHR12174:SF23	InterPro:Peptidase_A22B_SPP	InterPro:Preselin/SPP	SMART:SM00730	TMHMM:TMhelix
UniParc:UPI0003939365	SEG:seg	:	:	:	:

Description

Similar to signal peptide peptidase family protein. (Os05t0436400-01);Hypothetical gene. (Os05t0436400-02);Similar to signal peptide peptidase family protein. (Os05t0436400-03)

Coordinates

chr5:+:21371320..21376448

Molecular Weight (calculated)

31998.4 Da

IEP (calculated)

7.870

GRAVY (calculated)

0.554

Length

286 amino acids

Sequence
(BLAST)

001: EHAMRFPLVG SAMLLSLFLL FKFLSKDLVN TVLTAYFFIL GIAALCATLL PSIKRFLPKE WNDNAIVWRA PLFHSLSVEF TRSQVVASIP GFFFCIWYAA
101: KKHWLANNVL GISFCIQGIE MLSLGSFKTG AILLSGLFFY DIFWVFFTPV MVSVAKSFDA PIKLLFPTGD AARPFSMLGL GDIVIPGIFV ALALRFDVSR
201: GIKNRYFNSA FLGYTVGLTV TIIVMNWFQA AQPALLYIVP GVIGFVAVHC LWNGEVKPLL EYNESKAEEE EACEEDTDSK QNKKKE

Best Arabidopsis Sequence Match ( AT2G03120.1 )
(BLAST)

001: MKNCERFANL ALAGLTLAPL VVRVNPNLNV ILTACITVYV GCFRSVKDTP PTETMSKEHA MRFPLVGSAM LLSLFLLFKF LSKDLVNAVL TAYFFVLGIV
101: ALSATLLPAI RRFLPNPWND NLIVWRFPYF KSLEVEFTKS QVVAGIPGTF FCAWYAWKKH WLANNILGLS FCIQGIEMLS LGSFKTGAIL LAGLFFYDIF
201: WVFFTPVMVS VAKSFDAPIK LLFPTGDALR PYSMLGLGDI VIPGIFVALA LRFDVSRRRQ PQYFTSAFIG YAVGVILTIV VMNWFQAAQP ALLYIVPAVI
301: GFLASHCIWN GDIKPLLAFD ESKTEEATTD ESKTSEEVNK AHDE

Arabidopsis Description

SPPSignal peptide peptidase [Source:UniProtKB/Swiss-Prot;Acc:O81062]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.